Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05866 and RBAM_035640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:23
# Commandline: needle
# -asequence dna-align/BSNT_05866___ywbC.1.9828.seq
# -bsequence dna-align/RBAM_035640___ywbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05866___ywbC-RBAM_035640___ywbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05866___ywbC-RBAM_035640___ywbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05866___ywbC
# 2: RBAM_035640___ywbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 297/389 (76.3%)
# Similarity: 297/389 (76.3%)
# Gaps: 13/389 ( 3.3%)
# Score: 1134.0
#
#
#=======================================
BSNT_05866___ 1 ATG---GCAAAACGAATTGACCATACAGGCATCATGGTAAGAGATATTAA 47
||| ||.|||.||||.||||||||||||||.|||||.|.|||||||.|
RBAM_035640__ 1 ATGACAGCCAAAAGAATCGACCATACAGGCATTATGGTCAAAGATATTGA 50
BSNT_05866___ 48 CGCGTCCATCACATTTTATGAAGAGGTACTCGGCATGAAATTGAAGGATC 97
..|.||||||.|.||||||.||||.||.|||||.|||.|.||.|||||||
RBAM_035640__ 51 AACATCCATCGCCTTTTATCAAGACGTTCTCGGTATGCAGTTAAAGGATC 100
BSNT_05866___ 98 GCATCACACACACGAACGGTGTAATCGAGCTTGCATTTCTTGGCTTTGAA 147
|.|||||.||.||||||||..|.||.||.|||||.|||||.||||||.|.
RBAM_035640__ 101 GTATCACTCATACGAACGGCATTATTGAACTTGCCTTTCTCGGCTTTCAG 150
BSNT_05866___ 148 GACGGACCGGAAACAGAAATTGAACTGATTCAAGGCTACAGCAGCGAGCT 197
||.||.|||||.|||||||||||.|||||.||.|||||||||||||||||
RBAM_035640__ 151 GAAGGGCCGGAGACAGAAATTGAGCTGATCCAGGGCTACAGCAGCGAGCT 200
BSNT_05866___ 198 TCCCGCTGAAGGAAAAGTGCACCACATTGCCCTGCTGACTGATGACATCG 247
||||||.|||||||||||.||||||.|.||..|..|.|||||.||.||||
RBAM_035640__ 201 TCCCGCAGAAGGAAAAGTTCACCACTTCGCTTTATTAACTGAAGATATCG 250
BSNT_05866___ 248 CGGCTGAATATACAAAAGCGAA-----AAAAATGAACGCGAAATTTATCG 292
||||.||.|..||..|.||||| | |..|||...||||||||
RBAM_035640__ 251 CGGCGGAGTTCACGCATGCGAAGCGTCA-----GGGCGCCGTATTTATCG 295
BSNT_05866___ 293 ACGAGGAGATCACAACACTTCCAAACGGATACCGTTATTTCTATATCGAA 342
|.||.||.|||||.||.|||||.|||||.|||||.||.||.||.||.|||
RBAM_035640__ 296 ATGAAGAAATCACGACGCTTCCGAACGGGTACCGCTACTTTTACATTGAA 345
BSNT_05866___ 343 GGCCCTGACGGTGAGTGGATTGAGTTCTTTCAGCGATAA 381
||.||||||||.||.||||||||.||.||.|||||.|||
RBAM_035640__ 346 GGACCTGACGGCGAATGGATTGAATTTTTCCAGCGTTAA 384
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