Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05864 and RBAM_035630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:23
# Commandline: needle
# -asequence pep-align/BSNT_05864___ywbD.1.9828.seq
# -bsequence pep-align/RBAM_035630___ywbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05864___ywbD-RBAM_035630___ywbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05864___ywbD-RBAM_035630___ywbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05864___ywbD
# 2: RBAM_035630___ywbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 316/395 (80.0%)
# Similarity: 355/395 (89.9%)
# Gaps: 0/395 ( 0.0%)
# Score: 1680.0
#
#
#=======================================
BSNT_05864___ 1 MKLLTLKKAHAAKIKKGYPLIEKEALAGSAGHMKEGDIVDIVSESGEFLA 50
|||||:|...|.|:|||:|||||:||:||:.|:.|||:.|:.||.|||:.
RBAM_035630__ 1 MKLLTVKDTFAGKLKKGFPLIEKDALSGSSAHLTEGDLFDVTSEKGEFIG 50
BSNT_05864___ 51 RGYYGLQNKGVGWTLTRNKHEQIDQAFFLTKLTKAAQARAKLFEAQDTTA 100
:||||||||||||.|:|.:.|:||..|||.||.|||:|||.||:|.||||
RBAM_035630__ 51 KGYYGLQNKGVGWVLSRARDERIDGRFFLDKLKKAAEARAHLFKAPDTTA 100
BSNT_05864___ 101 FRLFNGEGDGVGGVTIDYYDGYLLVQWYSKGIYTFKDMLISALDEMDLDY 150
||||||||||:||||||:||||||:||||||||.:||.:|.|:|.::|.|
RBAM_035630__ 101 FRLFNGEGDGIGGVTIDFYDGYLLIQWYSKGIYAYKDSMIEAIDGLELSY 150
BSNT_05864___ 151 KAIYEKKRFDTAGQYVEDDDFVKGKRGEFPIIIQENGIQYAVDLNEGAMT 200
||||||||||||||||||||||||:||:||:|:|||||:||||||:||||
RBAM_035630__ 151 KAIYEKKRFDTAGQYVEDDDFVKGERGDFPVIVQENGIRYAVDLNDGAMT 200
BSNT_05864___ 201 GIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAALGGAEKTTSVDV 250
|||||||||||||||:||.|:.||||||||||||||||||||||||||||
RBAM_035630__ 201 GIFLDQRHVRKAIRDKYANGRRVLNTFSYTGAFSVAAALGGAEKTTSVDV 250
BSNT_05864___ 251 ANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAEKKDLRFDLIILDP 300
|||||||||||||.|.:|||||||||||||.||.|||||.|.||||||||
RBAM_035630__ 251 ANRSLAKTIEQFSANGIDYEAHDIKVMDVFKYFGYAEKKGLEFDLIILDP 300
BSNT_05864___ 301 PSFARTKKRTFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKG 350
|||||||||||||||||||||||||||||..|:||||||||||.||||||
RBAM_035630__ 301 PSFARTKKRTFSAAKDYKNLLKETIAITAKNGIIVASTNSSAFNMKKFKG 350
BSNT_05864___ 351 FIDAAFKETNERYTIIEEFTLPKDFKTISAFPEGNYLKVVLLQKK 395
||:.|||||||||.|:||:|||:|||||.||.||||||||.|:||
RBAM_035630__ 351 FIETAFKETNERYDILEEYTLPEDFKTIPAFKEGNYLKVVFLRKK 395
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