Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02059 and RBAM_035620

See DNA alignment / Visit BSNT_02059 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02059___yjfC.1.9828.seq
#    -bsequence pep-align/RBAM_035620.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02059___yjfC-RBAM_035620.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02059___yjfC-RBAM_035620.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02059___yjfC
# 2: RBAM_035620
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     178/302 (58.9%)
# Similarity:   231/302 (76.5%)
# Gaps:           5/302 ( 1.7%)
# Score: 966.0
# 
#
#=======================================

BSNT_02059___      1 ---MNLVMEKTFEQYEKLFSMKEQKREDEFRYTMMRPFEKMWTAIQVPLK     47
                        :.:::|.|..|||.||||.| .|||.:||:||:|||.||..:.||||
RBAM_035620        1 MVPIKIIIEDTIGQYETLFSMIE-NREDYYRYSMMKPFEDMWKKMNVPLK     49

BSNT_02059___     48 AKEPNGYDVIMAAKMLGYLDVRDAESGQKALQILKESHVSETAESALRQC     97
                     ||:||||||||||.|||||.:.|.|:|:|||:.|||....:.|...|..|
RBAM_035620       50 AKQPNGYDVIMAANMLGYLSIFDTETGRKALENLKEIQALQIAYGTLTHC     99

BSNT_02059___     98 IFFAEREQLRVNAEEIKFGLYIADPNKLQLQKGYCGFGGIPGFIHVWIDP    147
                     :.|.::.:|::||:||:||:|:|:..||:|.:||||||||||||.|.|.|
RBAM_035620      100 VEFIQQNRLKINADEIRFGMYLANQKKLELHRGYCGFGGIPGFIQVSIFP    149

BSNT_02059___    148 NRYNLPRIPSIIAHEFHHNVRFSYIDFHHGSVSVGDYLVIEGLAESFARE    197
                     |.||:||:|::||||||||:||||.::.:|:|:|||||:|||||||||:|
RBAM_035620      150 NSYNIPRLPAVIAHEFHHNIRFSYFNWDYGNVTVGDYLIIEGLAESFAKE    199

BSNT_02059___    198 LFGTERLGPWVTRFDHEDLQYSIDVINEVLDVKGFSEVSRYMFGDPIAND    247
                     |:|...||||||.|:.|||:||.::|.:.|:.|||:|||.|||||..|.:
RBAM_035620      200 LYGEALLGPWVTSFEKEDLEYSKEIIKDSLNKKGFAEVSSYMFGDTFAAE    249

BSNT_02059___    248 QGFKPAGLSAFAGYAVGYHAVQSFMNQHHMTISEATRLDAKTILSQCGLF    297
                     ||::|.|||.||||||||.||||||..:::.|||||.|....|||..|||
RBAM_035620      250 QGYQPVGLSPFAGYAVGYQAVQSFMKANNVGISEATLLGTDEILSNSGLF    299

BSNT_02059___    298 SK    299
                     . 
RBAM_035620      300 L-    300


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