Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05863 and RBAM_035600

See DNA alignment / Visit BSNT_05863 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05863___ywbE.1.9828.seq
#    -bsequence pep-align/RBAM_035600___ywbE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05863___ywbE-RBAM_035600___ywbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05863___ywbE-RBAM_035600___ywbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05863___ywbE
# 2: RBAM_035600___ywbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      52/68 (76.5%)
# Similarity:    57/68 (83.8%)
# Gaps:           4/68 ( 5.9%)
# Score: 263.0
# 
#
#=======================================

BSNT_05863___      1 ---MNGQERNSISKGLQVDIVLKEDQKTGKLTRGTVKDILTKSSFHPHGI     47
                        ||||:|:||.|||:||||||.||::||||||.||||||.|||||.||
RBAM_035600__      1 MCHMNGQQRSSIRKGLEVDIVLKADQRSGKLTRGIVKDILTNSSFHPRGI     50

BSNT_05863___     48 KVRLEDGRIGRVQQIIST     65
                     |||||||||||||.||. 
RBAM_035600__     51 KVRLEDGRIGRVQHIIE-     67


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.