Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05863 and RBAM_035600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:23
# Commandline: needle
# -asequence dna-align/BSNT_05863___ywbE.1.9828.seq
# -bsequence dna-align/RBAM_035600___ywbE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05863___ywbE-RBAM_035600___ywbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05863___ywbE-RBAM_035600___ywbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05863___ywbE
# 2: RBAM_035600___ywbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 153/213 (71.8%)
# Similarity: 153/213 (71.8%)
# Gaps: 24/213 (11.3%)
# Score: 567.5
#
#
#=======================================
BSNT_05863___ 1 ---------ATGAACGGGCAAGAGCGAAACAGCATTTC-GAAAGGG--TT 38
||||||||.||..||||||.||||| || ||||.|| ||
RBAM_035600__ 1 ATGTGTCATATGAACGGCCAGCAGCGAAGCAGCA--TCAGAAAAGGACTT 48
BSNT_05863___ 39 GCAGGTGGATATTGTATTGAAAGAGGATCAAAAAACAGGAAAACTGACGC 88
| |.||.|||||.||..||||||..|||||.....|||||||.|||||..
RBAM_035600__ 49 G-AAGTCGATATCGTCCTGAAAGCCGATCAGCGTTCAGGAAAGCTGACAA 97
BSNT_05863___ 89 GAGGGACAGTGAAGGATATTTTGACGAAATCAAGCTTTCATCCGCACGGC 138
||||.|..||||||||||||||||||||.||||||||.||.||||.||||
RBAM_035600__ 98 GAGGAATCGTGAAGGATATTTTGACGAACTCAAGCTTCCACCCGCGCGGC 147
BSNT_05863___ 139 ATTAAAGTCCGGCTTGAAGATGGCCGCATCGGCCGCGTCCAGCAGATCAT 188
|||||.|||||.||||||||.||.||.||||||||.||||||||.||.||
RBAM_035600__ 148 ATTAAGGTCCGCCTTGAAGACGGACGAATCGGCCGGGTCCAGCACATTAT 197
BSNT_05863___ 189 TTCTACATAA--- 198
| .||
RBAM_035600__ 198 T------GAATAG 204
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