Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05860 and RBAM_035590
See
DNA alignment /
Visit
BSNT_05860 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence pep-align/BSNT_05860___ywbG.1.9828.seq
# -bsequence pep-align/RBAM_035590___ywbG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05860___ywbG-RBAM_035590___ywbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05860___ywbG-RBAM_035590___ywbG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05860___ywbG
# 2: RBAM_035590___ywbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 209/226 (92.5%)
# Similarity: 219/226 (96.9%)
# Gaps: 1/226 ( 0.4%)
# Score: 1048.0
#
#
#=======================================
BSNT_05860___ 1 MFIGIVSLFLTVLVYLGAKKVYQRFPRVYTSPLLVTPAVLVGLLLLVNVP 50
|||||:||||||||||||||:|.|||||||||||:||||||.||||||||
RBAM_035590__ 1 MFIGIISLFLTVLVYLGAKKLYIRFPRVYTSPLLITPAVLVVLLLLVNVP 50
BSNT_05860___ 51 YESYNLGGGLLTDMLQPATVAFAIPLYKYFPVLKKYAVEIILNVAVGSCI 100
|::||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_035590__ 51 YQTYNLGGGLLTDMLQPATVAFAIPLYKYFPILKKYAVEIILNVAVGSCI 100
BSNT_05860___ 101 AIISTALIAKWLHLGTGLIDSLVPRSVTTPIAMNVSEMIGGMPAVTAVFV 150
||:|||.||||.|||:.|:|||||||||||||||||||||||||||||||
RBAM_035590__ 101 AILSTAFIAKWFHLGSSLVDSLVPRSVTTPIAMNVSEMIGGMPAVTAVFV 150
BSNT_05860___ 151 ILTALLGTVIGPMVIRYFRIDNEIARGVLLGTSAHGAGTSKAFELSSVSG 200
||||||||:|||||||||||||||||||||||||||||||||||||||||
RBAM_035590__ 151 ILTALLGTIIGPMVIRYFRIDNEIARGVLLGTSAHGAGTSKAFELSSVSG 200
BSNT_05860___ 201 TISSVSMILAAIMTLCAAPFLLSFM- 225
|||||||||||||||||||.|||||
RBAM_035590__ 201 TISSVSMILAAIMTLCAAPILLSFMS 226
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.