Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05860 and RBAM_035590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence dna-align/BSNT_05860___ywbG.1.9828.seq
# -bsequence dna-align/RBAM_035590___ywbG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05860___ywbG-RBAM_035590___ywbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05860___ywbG-RBAM_035590___ywbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05860___ywbG
# 2: RBAM_035590___ywbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 561/682 (82.3%)
# Similarity: 561/682 (82.3%)
# Gaps: 5/682 ( 0.7%)
# Score: 2321.0
#
#
#=======================================
BSNT_05860___ 1 GTGTTCATCGGAATTGTAAGCTTGTTTTTAACGGTTTTGGTGTATTTAGG 50
||||||||||||||..||||.||.||.|||||.||.||.||.|||||.||
RBAM_035590__ 1 GTGTTCATCGGAATCATAAGTTTATTCTTAACTGTCTTAGTATATTTGGG 50
BSNT_05860___ 51 AGCAAAAAAGGTATATCA-ACGCTTTCCGCGTGTTTATACGTCGCCGCTA 99
.||.|||||..|.|| || .||.||||||||.||.||||||||||||||.
RBAM_035590__ 51 CGCGAAAAAACTCTA-CATTCGTTTTCCGCGGGTGTATACGTCGCCGCTT 99
BSNT_05860___ 100 TTGGTGACGCCCGCTGTGTTAGTCGGTCTGCTGCTGCTGGTGAATGTCCC 149
.||.|.|||||||||||.||.||||..||||||||.||.||.||||||||
RBAM_035590__ 100 CTGATTACGCCCGCTGTTTTGGTCGTACTGCTGCTTCTTGTCAATGTCCC 149
BSNT_05860___ 150 GTACGAGTCCTATAATCTCGGCGGCGGATTGCTGACCGATATGCTACAGC 199
|||..||.|.||.|||||||||||||||.||||||||||||||||.||||
RBAM_035590__ 150 GTATCAGACATACAATCTCGGCGGCGGACTGCTGACCGATATGCTTCAGC 199
BSNT_05860___ 200 CGGCCACCGTGGCATTCGCGATCCCGCTATATAAATATTTCCCTGTTTTA 249
||||.||.|||||.|||||.||||||||.||||||||||||||..|||||
RBAM_035590__ 200 CGGCAACAGTGGCGTTCGCCATCCCGCTTTATAAATATTTCCCGATTTTA 249
BSNT_05860___ 250 AAGAAATACGCAGTGGAAATTATTTTGAATGTGGCCGTCGGTTCATGCAT 299
|||||||||||.|||||||||||||||||.||.||.|||||||||||.||
RBAM_035590__ 250 AAGAAATACGCCGTGGAAATTATTTTGAACGTAGCGGTCGGTTCATGTAT 299
BSNT_05860___ 300 CGCGATTATTTCTACCGCTCTTATTGCGAAATGGCTTCACCTCGGCACCG 349
|||.|||.|.||.||.||..||||.|||||||||.|.||.|||||||.|.
RBAM_035590__ 300 CGCCATTCTGTCAACGGCCTTTATCGCGAAATGGTTCCATCTCGGCAGCA 349
BSNT_05860___ 350 GCTTAATTGACAGCCTCGTCCCGAGATCAGTGACAACGCCGATCGCGATG 399
|||||.|.|||||.|||||.|||.||||.|||||.||||||||.||.|||
RBAM_035590__ 350 GCTTAGTCGACAGTCTCGTGCCGCGATCCGTGACGACGCCGATTGCCATG 399
BSNT_05860___ 400 AACGTATCTGAAATGATCGGCGGAATGCCTGCCGTCACAGCCGTGTTTGT 449
|||||.||.||||||||||||||.|||||.|||||.|||||.||.||.||
RBAM_035590__ 400 AACGTTTCAGAAATGATCGGCGGGATGCCGGCCGTTACAGCGGTTTTCGT 449
BSNT_05860___ 450 GATTTTAACCGCTTTGCTCGGCACAGTGATCGGTCCGATGGTCATCCGTT 499
.||||||||.|||||..|.||.||..|.|||||.||||||||||||||.|
RBAM_035590__ 450 CATTTTAACGGCTTTATTGGGAACGATCATCGGGCCGATGGTCATCCGCT 499
BSNT_05860___ 500 ATTTCCGCATTGATAACGAAATCGCGCGGGGCGTGCTGCTCGGCACAAGC 549
||||||||||||||||||||||.||.|||||||||||||||||.||.|||
RBAM_035590__ 500 ATTTCCGCATTGATAACGAAATTGCCCGGGGCGTGCTGCTCGGAACTAGC 549
BSNT_05860___ 550 GCGCACGGAGCGGGAACGTCAAAGGCATTTGAGCTTAGCTCTGTGTCCGG 599
|||||||||||||||||.||.||.|||||||||||.|||||.||.||.||
RBAM_035590__ 550 GCGCACGGAGCGGGAACATCTAAAGCATTTGAGCTCAGCTCCGTATCAGG 599
BSNT_05860___ 600 CACGATTTCCAGCGTATCGATGATCTTAGCTGCGATTATGACGCTTTGCG 649
.|||||.||.|||||.||.|||||..|.||.||.|||||||||||.||||
RBAM_035590__ 600 AACGATCTCAAGCGTGTCCATGATTCTCGCCGCAATTATGACGCTGTGCG 649
BSNT_05860___ 650 CGGCGCCGTTTTTGCTTTCATTTATGTAA--- 678
||||.|||.||||||||||.|||||||.|
RBAM_035590__ 650 CGGCCCCGATTTTGCTTTCGTTTATGTCATAA 681
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