Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05858 and RBAM_035570

See DNA alignment / Visit BSNT_05858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05858___ywbI.1.9828.seq
#    -bsequence pep-align/RBAM_035570___ywbI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05858___ywbI-RBAM_035570___ywbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05858___ywbI-RBAM_035570___ywbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05858___ywbI
# 2: RBAM_035570___ywbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     276/302 (91.4%)
# Similarity:   288/302 (95.4%)
# Gaps:           1/302 ( 0.3%)
# Score: 1458.0
# 
#
#=======================================

BSNT_05858___      1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYR     50
                     ||||||||||||||||||||||||||||||||||||||||.||||:||||
RBAM_035570__      1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLETELGIKLFYR     50

BSNT_05858___     51 NGRQVELTDAGHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPM    100
                     |||||||||||.|||||||||.||||||||||||||||||||||||||||
RBAM_035570__     51 NGRQVELTDAGQSMYVQAQEITKSFQNLTSELNDIMEVKKGHVRIGLPPM    100

BSNT_05858___    101 IGSGFFPRVLGDFRENYPNVTFQLVEDGSIKVQEGVGDGSLDIGVVVLPA    150
                     ||||||||||||||..||:||||||||||||||:||.|||||||||||||
RBAM_035570__    101 IGSGFFPRVLGDFRVTYPDVTFQLVEDGSIKVQQGVEDGSLDIGVVVLPA    150

BSNT_05858___    151 NEDIFHSFTIVKETLMLVVHPSHRLADEKECQLSELKDEPFIFFREDFVL    200
                     ||:|||:||||||||||||||||||||||||.|.|||:||||||||||||
RBAM_035570__    151 NEEIFHTFTIVKETLMLVVHPSHRLADEKECSLHELKEEPFIFFREDFVL    200

BSNT_05858___    201 HNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIGLLPERICRGLDP    250
                     ||||||||:|||||||:|||||||||||||||||||||||||||||||||
RBAM_035570__    201 HNRIMTECVKAGFRPHVIYETSQWDFISEMVSANLGIGLLPERICRGLDP    250

BSNT_05858___    251 EKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTKSYLWDPKKESK    300
                     :||:.||||.||||||||||||||||:||||||||||||||||:|||..|
RBAM_035570__    251 DKVRTIPLVHPVIPWHLAIIWRKDRYMSFAARAWLEHTKSYLWNPKKRKK    300

BSNT_05858___    301 G-    301
                     . 
RBAM_035570__    301 DD    302


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