Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05858 and RBAM_035570
See
Amino acid alignment /
Visit
BSNT_05858 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence dna-align/BSNT_05858___ywbI.1.9828.seq
# -bsequence dna-align/RBAM_035570___ywbI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05858___ywbI-RBAM_035570___ywbI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05858___ywbI-RBAM_035570___ywbI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05858___ywbI
# 2: RBAM_035570___ywbI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 914
# Identity: 742/914 (81.2%)
# Similarity: 742/914 (81.2%)
# Gaps: 13/914 ( 1.4%)
# Score: 3012.5
#
#
#=======================================
BSNT_05858___ 1 ATGGATATCCGCCATTTAACATATTTCTTGGAAGTCGCCCGTTTAAAAAG 50
|||||||||||.||.|||||.|||||.||||||||.||||||||.|||||
RBAM_035570__ 1 ATGGATATCCGGCACTTAACGTATTTTTTGGAAGTGGCCCGTTTGAAAAG 50
BSNT_05858___ 51 TTTTACGAAGGCTTCCCAATCCCTTTATGTTTCTCAGCCGACGATATCAA 100
.||||||||||||||.||.||.||.||||||||.||||||||.||.||||
RBAM_035570__ 51 CTTTACGAAGGCTTCGCAGTCGCTGTATGTTTCACAGCCGACAATCTCAA 100
BSNT_05858___ 101 AAATGATCAAAAA--TTTAGAAGAAGAGCTCGGAATTGAACTGTTTTACC 148
|||||||.||||| |..|||.| ||||||||.|||.|.||||||||||
RBAM_035570__ 101 AAATGATTAAAAACCTGGAGACG--GAGCTCGGCATTAAGCTGTTTTACC 148
BSNT_05858___ 149 GAAACGGCAGGCAGGTAGAACTGACTGATGCCGGTCATAGCATGTATGTG 198
|.||.|||.||||.||.|||||||||||.|||||.||.||||||||||||
RBAM_035570__ 149 GCAATGGCCGGCAAGTTGAACTGACTGACGCCGGGCAGAGCATGTATGTG 198
BSNT_05858___ 199 CAGGCGCAGGAAATCATTAAATCATTTCAAAACCTGACGTCAGAATTAAA 248
||||||||||||||||..||.|||||.|||||||||||||||||..|.||
RBAM_035570__ 199 CAGGCGCAGGAAATCACAAAGTCATTCCAAAACCTGACGTCAGAGCTGAA 248
BSNT_05858___ 249 TGATATTATGGAAGTCAAGAAAGGGCACGTACGGATTGGACTGCCGCCGA 298
.||||||||||||||.||||||||||||||.||.||.||.||.|||||||
RBAM_035570__ 249 CGATATTATGGAAGTGAAGAAAGGGCACGTCCGCATCGGTCTTCCGCCGA 298
BSNT_05858___ 299 TGATCGGATCGGGGTTTTTCCCGAGAGTGCTCGGCGATTTCCGTGAAAAC 348
|||||||.||.||.||||||||||||||||||||.||.|||||.|..|..
RBAM_035570__ 299 TGATCGGGTCCGGCTTTTTCCCGAGAGTGCTCGGTGACTTCCGCGTCACA 348
BSNT_05858___ 349 TATCCGAATGTCACCTTTCAGCTAGTCGAAGACGGTTCTATAAAAGTCCA 398
|||||..||||.||.||||||||.||.||.|||||.|||||.|||||.||
RBAM_035570__ 349 TATCCCGATGTGACGTTTCAGCTTGTTGAGGACGGCTCTATTAAAGTGCA 398
BSNT_05858___ 399 AGAAGGTGTCGGGGACGGCTCTCTTGATATCGGCGTTGTGGTCCTTCCCG 448
..||||.||.|.|||||||||.|||||||||||.||.||.||.|||||||
RBAM_035570__ 399 GCAAGGGGTGGAGGACGGCTCGCTTGATATCGGGGTCGTCGTGCTTCCCG 448
BSNT_05858___ 449 CAAACGAAGATATCTTTCATTCGTTTACAATCGTAAAAGAAACCTTAATG 498
||||.|||||.||.||||||.||||.||||||||.||.||||||.|.|||
RBAM_035570__ 449 CAAATGAAGAGATTTTTCATACGTTCACAATCGTCAAGGAAACCCTTATG 498
BSNT_05858___ 499 CTTGTCGTTCACCCTTCCCACCGGCTGGCTGATGAGAAAGAATGTCAG-C 547
||.|||||.||.||.||.||.|||||.|||||.||||||||||| ||| |
RBAM_035570__ 499 CTCGTCGTCCATCCGTCACATCGGCTCGCTGACGAGAAAGAATG-CAGTC 547
BSNT_05858___ 548 TGAGTGAGTTGAAGGACGAGCCTTTTATTTTCTTCAGAGAGGATTTTGTC 597
|....||.|||||.||.|||||.||.||.||.|||||.||||||||||||
RBAM_035570__ 548 TTCACGAATTGAAAGAAGAGCCGTTCATATTTTTCAGGGAGGATTTTGTC 597
BSNT_05858___ 598 CTGCACAACCGAATTATGACGGAATGTATCAAGGCTGGGTTCCGGCCCCA 647
||.||.||.|||||||||||||||||..|.||.||.||.|||.||||.||
RBAM_035570__ 598 CTTCATAATCGAATTATGACGGAATGCGTGAAAGCCGGATTCAGGCCGCA 647
BSNT_05858___ 648 TATCATTTATGAAACATCACAATGGGATTTTATTAGTGAGATGGTATCAG 697
..|||||||||||||.|||||.|||||.|||||.||.||.||||||||.|
RBAM_035570__ 648 CGTCATTTATGAAACGTCACAGTGGGACTTTATCAGCGAAATGGTATCCG 697
BSNT_05858___ 698 CCAACCTTGGGATCGGGCTTTTGCCGGAACGGATCTGCCGCGGCCTTGAC 747
||||.||.||.|||||.||.|||||||||.|.|||||||||||.|||||.
RBAM_035570__ 698 CCAATCTCGGTATCGGCCTCTTGCCGGAAAGAATCTGCCGCGGTCTTGAT 747
BSNT_05858___ 748 CCGGAAAAAGTGAAAGTCATTCCGCTTGTCGATCCGGTCATCCCTTGGCA 797
||.||.|||||.|.|..|||||||||.||..||||||||||.||.|||||
RBAM_035570__ 748 CCTGACAAAGTCAGAACCATTCCGCTCGTTCATCCGGTCATTCCGTGGCA 797
BSNT_05858___ 798 CCTCGCCATTATTTGGAGAAAGGACCGGTACTTGTCGTTTGCGGCCAGAG 847
..|.|||||.||||||.|.||.|||||.||..||||.|||||.|||||||
RBAM_035570__ 798 TTTAGCCATCATTTGGCGGAAAGACCGCTATATGTCCTTTGCCGCCAGAG 847
BSNT_05858___ 848 CTTGGCTCGAACATACGAAATCGTATTTATGGGACCCGAAAAA-AGAAAG 896
|.|||||.||.|||||||||||||||||||||.|.|||||||| |||||
RBAM_035570__ 848 CCTGGCTGGAGCATACGAAATCGTATTTATGGAATCCGAAAAAGAGAAA- 896
BSNT_05858___ 897 TAAAGGATGA---- 906
|||||||||
RBAM_035570__ 897 -AAAGGATGATTAA 909
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.