Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05857 and RBAM_035560

See DNA alignment / Visit BSNT_05857 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05857___thiM.1.9828.seq
#    -bsequence pep-align/RBAM_035560___thiM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05857___thiM-RBAM_035560___thiM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05857___thiM-RBAM_035560___thiM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05857___thiM
# 2: RBAM_035560___thiM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     186/272 (68.4%)
# Similarity:   211/272 (77.6%)
# Gaps:          19/272 ( 7.0%)
# Score: 914.0
# 
#
#=======================================

BSNT_05857___      1 -------------------MHSITNNVVTNFTANGLLALGASPVMAYAKE     31
                                        :||||||||||||||||||||||||||||.|
RBAM_035560__      1 MDAQTAAQHLSKVRDQNPLVHSITNNVVTNFTANGLLALGASPVMAYAIE     50

BSNT_05857___     32 EVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGA     81
                     |.||||||||||||||||||..||||||.|||||||:|||||.|||||||
RBAM_035560__     51 EAADMAKIAGALVLNIGTLSSASVEAMIAAGKSANENGVPVIFDPVGAGA    100

BSNT_05857___     82 TPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDI    131
                     |||||.||..||:||||:||||||||||:..|..||.||||||||.|||:
RBAM_035560__    101 TPFRTASASKIIQEVRLSAIRGNAAEIANIAGAPDWKIKGVDAGEAGGDV    150

BSNT_05857___    132 IRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLL    181
                     ::||:.||..|.|||||||:.|||:|.:..|.:|||.|||||||||||||
RBAM_035560__    151 VQLAKTAASGLKTVIAITGKTDVISDGADTYAVHNGDKLLTKVTGAGCLL    200

BSNT_05857___    182 TSVVGAFCAVEENPLFAAIVAISSYGVAAQLAAKQTADQGPGSFQIELLN    231
                     |||:|||||..::.|.||:.|:|.||.||||||..|:.:|||||||||||
RBAM_035560__    201 TSVIGAFCAAGQDVLQAAVSAVSVYGSAAQLAALDTSHKGPGSFQIELLN    250

BSNT_05857___    232 KLSTVTEQDVQEWATIERVTVS    253
                     ||::::||:..|.|.||||...
RBAM_035560__    251 KLASISEQEAAELAAIERVIEK    272


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