Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05856 and RBAM_035550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence pep-align/BSNT_05856___thiE.1.9828.seq
# -bsequence pep-align/RBAM_035550___thiE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05856___thiE-RBAM_035550___thiE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05856___thiE-RBAM_035550___thiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05856___thiE
# 2: RBAM_035550___thiE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 171/224 (76.3%)
# Similarity: 202/224 (90.2%)
# Gaps: 2/224 ( 0.9%)
# Score: 891.0
#
#
#=======================================
BSNT_05856___ 1 MTRISREMMKELLSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGG 50
||||||||||::||||||||||||.||||:||:||::|||||:||||||.
RBAM_035550__ 1 MTRISREMMKDMLSVYFIMGSNNTSADPVSVVEKAIEGGATLFQFREKGS 50
BSNT_05856___ 51 DALTGEARIEFAEKVQAACREAGVPFIVNDDVELALKLKADGIHIGQEDA 100
.:||||.|:.||::||..||:||:|||:||||||||:|:|||:||||:||
RBAM_035550__ 51 GSLTGEERLLFAKRVQDVCRQAGIPFIINDDVELALRLEADGVHIGQDDA 100
BSNT_05856___ 101 NAKEVRASIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTR 150
:|:|.||:|||||||||||.:||||:||..||||||:||:||||||||..
RBAM_035550__ 101 DAEETRAAIGDMILGVSAHNVSEVKRAEAAGADYVGMGPVYPTETKKDAE 150
BSNT_05856___ 151 AVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQ 200
|||||:|||.||||||:||||||||||.|||||||:||||||||||||||
RBAM_035550__ 151 AVQGVTLIEEVRRQGITIPIVGIGGITADNAAPVIEAGADGVSMISAISQ 200
BSNT_05856___ 201 AEDPESAARKFREEIQTYKTGR-- 222
||||::|||||.|||:..|.|.
RBAM_035550__ 201 AEDPKAAARKFSEEIRRSKAGLSR 224
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