Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05845 and RBAM_035480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence pep-align/BSNT_05845___ywcC.1.9828.seq
# -bsequence pep-align/RBAM_035480___ywcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05845___ywcC-RBAM_035480___ywcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05845___ywcC-RBAM_035480___ywcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05845___ywcC
# 2: RBAM_035480___ywcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 126/223 (56.5%)
# Similarity: 170/223 (76.2%)
# Gaps: 16/223 ( 7.2%)
# Score: 679.0
#
#
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BSNT_05845___ 1 MKKNKFQIKREATFESIIDAGVNLLIDRAYDPVSVEDISRAAGYSKGAFY 50
|||||||||||.||||.||||::|||:||||.||::|||:|||:||||||
RBAM_035480__ 1 MKKNKFQIKREETFESFIDAGLHLLIERAYDSVSIDDISKAAGFSKGAFY 50
BSNT_05845___ 51 VHFVSKDDFLLYLLEKRQMKKKIIIGYLDQMERESVKSLTLDEAAKHAAE 100
|||.||:|||.:||::||:||:||.||||::|:::.:.|||.|||..||.
RBAM_035480__ 51 VHFESKEDFLKHLLDRRQIKKRIITGYLDELEKQTARPLTLCEAAASAAS 100
BSNT_05845___ 101 LLYSYYINKPSWDITSFAMNMPTYKVLKKCKAYVRLYELWVEENVLYIKW 150
||..:..:||:|::.|||::||||||:.:.:||:|||:||:||:.:||.|
RBAM_035480__ 101 LLMRFVNSKPAWNVVSFAVHMPTYKVVSEYEAYIRLYKLWIEESTMYINW 150
BSNT_05845___ 151 LKERKLIDACIDPEYTAKIICAVLDGIIKQSYVLGQPATFRSFLDALSVF 200
||.|.||:..||.|:||.::||::||:||||.|||:|.||||..|||.||
RBAM_035480__ 151 LKSRNLIEDHIDTEHTANMMCALIDGMIKQSNVLGRPVTFRSMFDALYVF 200
BSNT_05845___ 201 FTLDREHETPRILKSFSESEEHQ 223
.:..:..
RBAM_035480__ 201 VSGRKSG---------------- 207
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