Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05844 and RBAM_035470

See DNA alignment / Visit BSNT_05844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05844___ywcD.1.9828.seq
#    -bsequence pep-align/RBAM_035470___ywcD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05844___ywcD-RBAM_035470___ywcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05844___ywcD-RBAM_035470___ywcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05844___ywcD
# 2: RBAM_035470___ywcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:     100/135 (74.1%)
# Similarity:   111/135 (82.2%)
# Gaps:           8/135 ( 5.9%)
# Score: 509.0
# 
#
#=======================================

BSNT_05844___      1 -------MYIIMGVFTTIVNIASFYILVEIMNVDYKAATVAAWILSVLFA     43
                            ||||||:|||||||||||.|.....:|||||||||||||||||
RBAM_035470__      1 MRYREIMMYIIMGIFTTIVNIASFYFLTSAFEMDYKAATVAAWILSVLFA     50

BSNT_05844___     44 YITNKLYVFQQKTHDLQSLLKELTAFFSVRVLSLGIDLGMMIILVGQFNT     93
                     |:|||||||||||..::||:||||||||||||||.|||.|||:||.||:.
RBAM_035470__     51 YVTNKLYVFQQKTAGMRSLMKELTAFFSVRVLSLTIDLAMMILLVSQFHM    100

BSNT_05844___     94 NETLAKILDNAVIVVVNYVASKWLVFKKTKEEGV-    127
                     |||||||.||.:||||||.||||:||:|.||||| 
RBAM_035470__    101 NETLAKIADNVIIVVVNYAASKWIVFRKAKEEGVS    135


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