Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05837 and RBAM_035430

See DNA alignment / Visit BSNT_05837 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:21
# Commandline: needle
#    -asequence pep-align/BSNT_05837___qoxA.1.9828.seq
#    -bsequence pep-align/RBAM_035430___qoxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05837___qoxA-RBAM_035430___qoxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05837___qoxA-RBAM_035430___qoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05837___qoxA
# 2: RBAM_035430___qoxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     288/321 (89.7%)
# Similarity:   308/321 (96.0%)
# Gaps:           3/321 ( 0.9%)
# Score: 1521.0
# 
#
#=======================================

BSNT_05837___      1 ---MFRALKPLLVLALLTVVFVLGGCSNASVLDPKGPVAEQQSDLILLSI     47
                        :|||.||||:||:|.|||||||||:.||||||||||:||.|||||||
RBAM_035430__      1 MIFLFRAFKPLLLLAMLAVVFVLGGCSDISVLDPKGPVADQQKDLILLSI     50

BSNT_05837___     48 GFMLFIVGVVFVLFTIILVKYRDRKGKDNGSYNPEIHGNTFLEVVWTVIP     97
                     ||||||||||||||||||||||||||||:|:|.||:||||||||||||||
RBAM_035430__     51 GFMLFIVGVVFVLFTIILVKYRDRKGKDSGNYKPEMHGNTFLEVVWTVIP    100

BSNT_05837___     98 ILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWVFSYPEQD    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_035430__    101 ILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWVFSYPEQD    150

BSNT_05837___    148 IETVNYLNIPVDRPILFKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQ    197
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
RBAM_035430__    151 IETVNYLNIPVDRPVLFKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQ    200

BSNT_05837___    198 ADKVGTYEGRNANFTGEHFADQEFDVNAVTEKDFNSWVKKTQNEAPKLTK    247
                     ||||||||||||||||||||||:|:|.|||:|||||||||.|:::|||||
RBAM_035430__    201 ADKVGTYEGRNANFTGEHFADQKFNVKAVTQKDFNSWVKKAQSDSPKLTK    250

BSNT_05837___    248 EKYDELMLPENVDELTFSSTHLKYVDHGQDAEYAMEARKRLGYQAVSPHS    297
                     ||||||||||||.:|||||||||||||||||||||||||||||:||||||
RBAM_035430__    251 EKYDELMLPENVGKLTFSSTHLKYVDHGQDAEYAMEARKRLGYKAVSPHS    300

BSNT_05837___    298 KTDPFENVKKNEFKKSDDTEE    318
                     ||||:|||||||||.|||.::
RBAM_035430__    301 KTDPWENVKKNEFKVSDDKQD    321


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