Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05837 and RBAM_035430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:21
# Commandline: needle
# -asequence dna-align/BSNT_05837___qoxA.1.9828.seq
# -bsequence dna-align/RBAM_035430___qoxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05837___qoxA-RBAM_035430___qoxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05837___qoxA-RBAM_035430___qoxA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05837___qoxA
# 2: RBAM_035430___qoxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 968
# Identity: 822/968 (84.9%)
# Similarity: 822/968 (84.9%)
# Gaps: 13/968 ( 1.3%)
# Score: 3557.0
#
#
#=======================================
BSNT_05837___ 1 ---------TTGTTCAGAGCATTAAAACCGTTGCTTGTATTAGCGCTGTT 41
||||||||||||||.||||||||.|||.||||||||.||||
RBAM_035430__ 1 GTGATCTTCTTGTTCAGAGCATTTAAACCGTTACTTTTATTAGCGATGTT 50
BSNT_05837___ 42 AACTGTGGTTTTCGTCCTTGGGGGATGCAGCAATGCTTCAGTACTAGATC 91
..||||.||||||||.||.||.|||||||||.|...|||.||..||||||
RBAM_035430__ 51 GGCTGTTGTTTTCGTACTGGGCGGATGCAGCGACATTTCCGTTTTAGATC 100
BSNT_05837___ 92 CGAAAGGACCTGTAGCTGAACAGCAAAGTGATTTAATCCTGTTATCTATC 141
||||||||||||||||.||.|||||.|..|||.|.||.||.||.||.|||
RBAM_035430__ 101 CGAAAGGACCTGTAGCAGACCAGCAGAAAGATCTGATTCTCTTGTCAATC 150
BSNT_05837___ 142 GGATTTATGCTGTTTATCGTCGGGGTCGTCTTTGTTCTATTTACCATTAT 191
||||||||||||||.||.|||||.|||||.||.||.||||||||.||.||
RBAM_035430__ 151 GGATTTATGCTGTTCATTGTCGGCGTCGTTTTCGTACTATTTACAATCAT 200
BSNT_05837___ 192 TTTAGTAAAATACCGCGACCGTAAAGGCAAAGATAATGGATCTTATAACC 241
||||||.||.|||||||||||.|||||||||||.|..|||..|||.||.|
RBAM_035430__ 201 TTTAGTGAAGTACCGCGACCGCAAAGGCAAAGACAGCGGAAATTACAAGC 250
BSNT_05837___ 242 CAGAAATTCACGGTAACACGTTTTTAGAAGTAGTCTGGACAGTGATCCCA 291
|.||.||.|||||.||||||||.|||||||||||||||||||||||||||
RBAM_035430__ 251 CCGAGATGCACGGCAACACGTTCTTAGAAGTAGTCTGGACAGTGATCCCA 300
BSNT_05837___ 292 ATTTTAATCGTCATTGCACTTTCTGTGCCAACAGTACAGACGATATATTC 341
||||||||.||.|||||||||||||||||.||.|||||||||||||||||
RBAM_035430__ 301 ATTTTAATTGTTATTGCACTTTCTGTGCCTACCGTACAGACGATATATTC 350
BSNT_05837___ 342 GTTAGAAAAAGCTCCTGAAGCAACAAAAGACAAAGAGCCTCTTGTTGTTT 391
||||||||||||.||||||||.|||||.||.|||||||||||||||||||
RBAM_035430__ 351 GTTAGAAAAAGCGCCTGAAGCGACAAAGGATAAAGAGCCTCTTGTTGTTT 400
BSNT_05837___ 392 ATGCTACTTCGGTAGACTGGAAATGGGTATTCAGCTACCCTGAACAGGAT 441
||||||||||||||||||||||||||||||||||||||||.||.||||||
RBAM_035430__ 401 ATGCTACTTCGGTAGACTGGAAATGGGTATTCAGCTACCCAGAGCAGGAT 450
BSNT_05837___ 442 ATTGAAACGGTCAACTACTTAAACATTCCTGTCGACCGCCCGATCTTGTT 491
|||||.|||||.||||||.|.|||||||||||.|||||.|||.|.||.||
RBAM_035430__ 451 ATTGAGACGGTTAACTACCTGAACATTCCTGTAGACCGTCCGGTTTTATT 500
BSNT_05837___ 492 CAAAATCTCATCTGCAGATTCAATGGCTTCGCTATGGATTCCTCAGCTTG 541
.|||||.||.||.||.|||||||||||.||||||||||||||||||||||
RBAM_035430__ 501 TAAAATTTCTTCAGCCGATTCAATGGCATCGCTATGGATTCCTCAGCTTG 550
BSNT_05837___ 542 GAGGACAAAAATATGCGATGGCAGGAATGCTGATGGATCAATACTTACAG 591
|.|||||||||||.||||||||.|||||||||||||||||||||||||||
RBAM_035430__ 551 GGGGACAAAAATACGCGATGGCGGGAATGCTGATGGATCAATACTTACAG 600
BSNT_05837___ 592 GCTGACAAAGTGGGTACTTACGAAGGCCGCAACGCGAACTTCACAGGTGA 641
||||||||||||||.||.||.|||||||||||||||||||||||.||.||
RBAM_035430__ 601 GCTGACAAAGTGGGAACATATGAAGGCCGCAACGCGAACTTCACCGGCGA 650
BSNT_05837___ 642 ACACTTTGCAGACCAAGAGTTTGATGTGAATGCAGTCACAGAAAAAGACT 691
|||||||||.|||||..|.||..|.||.||.||.||.||..|||||||||
RBAM_035430__ 651 ACACTTTGCCGACCAGAAATTCAACGTAAAAGCTGTTACGCAAAAAGACT 700
BSNT_05837___ 692 TTAACAGCTGGGTGAAAAAGACTCAGAACGAGGCTCCTAAGCTGACAAAA 741
|||||||||||||||||||..|.||.|.|||..||||.||||||||.|||
RBAM_035430__ 701 TTAACAGCTGGGTGAAAAAAGCCCAAAGCGATTCTCCAAAGCTGACGAAA 750
BSNT_05837___ 742 GAGAAGTATGATGAATTGATGCTTCCTGAAAATGTGGACGAATTAACGTT 791
|||||||||||.|||.||||||||||.||.|||||.|...||||||||||
RBAM_035430__ 751 GAGAAGTATGACGAACTGATGCTTCCGGAGAATGTCGGTAAATTAACGTT 800
BSNT_05837___ 792 CTCTTCTACTCACTTGAAATACGTTGATCACGGACAAGACGCTGAGTACG 841
|||||||||.|||||.|||||||||||.|||||.|||||.||.||.||.|
RBAM_035430__ 801 CTCTTCTACACACTTAAAATACGTTGACCACGGCCAAGATGCCGAATATG 850
BSNT_05837___ 842 CGATGGAGGCGCGCAAACGCCTTGGCTATCAAGCCGTTTCACCGCACTCT 891
||||||||||||||||||||||||||||..|||||||.||||||||||||
RBAM_035430__ 851 CGATGGAGGCGCGCAAACGCCTTGGCTACAAAGCCGTATCACCGCACTCT 900
BSNT_05837___ 892 AAAACAGATCCGTTTGAAAACGTAAAGAAAAACGAATTTAAGAAG--TCT 939
|||||||||||||..|||||.||||||||||||||||||| ||| ||.
RBAM_035430__ 901 AAAACAGATCCGTGGGAAAATGTAAAGAAAAACGAATTTA--AAGTATCC 948
BSNT_05837___ 940 GATGATACAGAAGAATGA 957
||.||||.|.||||.|||
RBAM_035430__ 949 GACGATAAACAAGATTGA 966
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