Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05833 and RBAM_035400

See DNA alignment / Visit BSNT_05833 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:21
# Commandline: needle
#    -asequence pep-align/BSNT_05833___qoxD.1.9828.seq
#    -bsequence pep-align/RBAM_035400___qoxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05833___qoxD-RBAM_035400___qoxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05833___qoxD-RBAM_035400___qoxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05833___qoxD
# 2: RBAM_035400___qoxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:     112/124 (90.3%)
# Similarity:   116/124 (93.5%)
# Gaps:           2/124 ( 1.6%)
# Score: 600.5
# 
#
#=======================================

BSNT_05833___      1 MANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGF     50
                     |||||||||||||||||||.|||:||||||||||||:||.||||||||||
RBAM_035400__      1 MANKSAEHSHFPWKHIVGFALSIILTLLALWVAVYTELSPSAKLWIIFGF     50

BSNT_05833___     51 AFIQAALQLLMFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAHY    100
                     |||||.|||||||||||||||.||||||||||||||||:|||||||||||
RBAM_035400__     51 AFIQAGLQLLMFMHMTESENGGIQVGNTLFGFFGAIVIILGSIWIFAAHY    100

BSNT_05833___    101 HHGDHMDGNPPGGAEHSEHSGHNE    124
                     ||||||||||||||:|  ||.|.|
RBAM_035400__    101 HHGDHMDGNPPGGAKH--HSEHQE    122


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