Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04115 and RBAM_035380

See DNA alignment / Visit BSNT_04115 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence pep-align/BSNT_04115.1.9828.seq
#    -bsequence pep-align/RBAM_035380___ysnE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04115-RBAM_035380___ysnE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04115-RBAM_035380___ysnE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04115
# 2: RBAM_035380___ysnE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      81/152 (53.3%)
# Similarity:   101/152 (66.4%)
# Gaps:          27/152 (17.8%)
# Score: 444.0
# 
#
#=======================================

BSNT_04115         1 --------------------------MSPPESIHALGLEKLRGPGITFWS     24
                                               .|||||||||..::||.|.:||||
RBAM_035380__      1 MDVRKEDVTAQDVIVLLQDHLKSMTMHSPPESIHALNADRLRQPDVTFWS     50

BSNT_04115        25 AWEGDELAGCGALKELDSWHGEVKSMRTSASHLRKGVAKQVLQHIIEEAE     74
                     |.|...|.||||||||:|.|||:|||:||..|:|||||.::|:|::|||.
RBAM_035380__     51 ARENGILLGCGALKELNSRHGEIKSMKTSPHHVRKGVANRILRHMLEEAR    100

BSNT_04115        75 KRGYERLSLETGSMASFEPARKLYESFGFQYCEPFADYDEDPNSVFMKKE    124
                     :|||:|:|||||||.:|.|||:|||..|||||:|||.|.|||||:||...
RBAM_035380__    101 QRGYQRISLETGSMEAFLPARRLYEKAGFQYCDPFAHYKEDPNSLFMTLN    150

BSNT_04115       125 L-    125
                     : 
RBAM_035380__    151 IG    152


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