Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05829 and RBAM_035370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:20
# Commandline: needle
# -asequence pep-align/BSNT_05829___rodA.1.9828.seq
# -bsequence pep-align/RBAM_035370___rodA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05829___rodA-RBAM_035370___rodA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05829___rodA-RBAM_035370___rodA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05829___rodA
# 2: RBAM_035370___rodA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 285/395 (72.2%)
# Similarity: 344/395 (87.1%)
# Gaps: 2/395 ( 0.5%)
# Score: 1540.5
#
#
#=======================================
BSNT_05829___ 1 MSRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIV 50
||||||||:|:||||||||||||.||||.:|||||||||||:..|::|||
RBAM_035370__ 1 MSRYKKQQNPYYQGDLIFIFGVFLIISVAAIYAAGQFGQYGSDAWMRQIV 50
BSNT_05829___ 51 FYFLGAVAITVLLYFDLEQLEKLSLYIFIIGILSLIILKISPESIAPVIK 100
||.:||..:..::|||||||||||||:.|.|:|||::|:::||||||:..
RBAM_035370__ 51 FYVIGAGLMVSIMYFDLEQLEKLSLYVLIAGVLSLLLLRVAPESIAPIKN 100
BSNT_05829___ 101 GAKSWFRIGRITIQPSEFMKVGLIMMLASVIGKANPKGVRTLRDDIHLLL 150
||||||:||..|:|||||.|:|::||:||:|.||.||..|:||:|::|||
RBAM_035370__ 101 GAKSWFKIGSFTLQPSEFTKIGIMMMVASIISKAGPKDQRSLREDVNLLL 150
BSNT_05829___ 151 KIAGVAVIPVGLILMQDAGTAGICMFIVLVMVFMSGINWKLIAIIAGSGI 200
|||...|||:|:|::|||||..||:|||:|||||||:|||||.||.||..
RBAM_035370__ 151 KIAAWTVIPIGMIVLQDAGTGAICLFIVMVMVFMSGVNWKLITIIGGSAA 200
BSNT_05829___ 201 LLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASN--ETQEDSNDSW 248
|::.|.|:::|.||.||.|:||.||||.|:|||:|.|: .||.:|:.||
RBAM_035370__ 201 LVLGLFLVLVIEFPHVANSIGIADYQINRITSWMSDSSAATTQAESDKSW 250
BSNT_05829___ 249 QVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAVV 298
|||||:||||||||.|||:.||||||||..|||||:|:||||||:|||:.
RBAM_035370__ 251 QVDQAVMAIGSGGITGNGVHNLKVYVPEGQTDFIFAILGESFGFLGCAIA 300
BSNT_05829___ 299 VIMFFFLIYRLVVLIDKIHPFNRFASFFCVGYTALIVIHTFQNIGMNIGI 348
|:||||||||||||||::|.||||.:|||||:||||||||||||||||||
RBAM_035370__ 301 VVMFFFLIYRLVVLIDRLHAFNRFGAFFCVGFTALIVIHTFQNIGMNIGI 350
BSNT_05829___ 349 MPVTGIPLLFVSYGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS 393
|||||||||||||||||.|||||.||||||||||||||:||||||
RBAM_035370__ 351 MPVTGIPLLFVSYGGSSVLSTLISFGIVYNASVQLTKYKSYLFNS 395
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