Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05827 and RBAM_035360

See DNA alignment / Visit BSNT_05827 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:20
# Commandline: needle
#    -asequence pep-align/BSNT_05827___nfrA.1.9828.seq
#    -bsequence pep-align/RBAM_035360___nfrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05827___nfrA-RBAM_035360___nfrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05827___nfrA-RBAM_035360___nfrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05827___nfrA
# 2: RBAM_035360___nfrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     209/249 (83.9%)
# Similarity:   229/249 (92.0%)
# Gaps:           0/249 ( 0.0%)
# Score: 1091.0
# 
#
#=======================================

BSNT_05827___      1 MNNTIETILNHRSIRSFTDQLLTAEEIDTLVKSAQAASTSSYVQAYSIIG     50
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_035360__      1 MNNTIETILNHRSIRSFTDELLTAEEIDTLVKSAQAASTSSYVQAYSIIG     50

BSNT_05827___     51 VSDPEKKRELSVLAGNQPYVEKNGHFFVFCADLYRHQQLAEEKGEHISEL    100
                     |:|.||||:|:.|||||||||.|||.||||||||||::|||||||:|:||
RBAM_035360__     51 VTDKEKKRKLAALAGNQPYVENNGHLFVFCADLYRHKKLAEEKGENITEL    100

BSNT_05827___    101 LENTEMFMVSLIDAALAAQNMSIAAESMGLGICYIGGIRNELDKVTEVLQ    150
                     ||||||||||:|||||||||:|:||||||||||||||||||||:|||||.
RBAM_035360__    101 LENTEMFMVSVIDAALAAQNVSVAAESMGLGICYIGGIRNELDQVTEVLG    150

BSNT_05827___    151 TPDHVLPLFGLAVGHPANLSGKKPRLPKQAVYHENTYNVNTDDFRHTMNT    200
                     |||||||||||.|||||:.||:|||||||||||||||:.|.:.||..|..
RBAM_035360__    151 TPDHVLPLFGLVVGHPAHPSGQKPRLPKQAVYHENTYDTNEEHFRSYMKE    200

BSNT_05827___    201 YDKTISDYYRERTNGQREETWSDQILNFMKQKPRTYLNDYVKEKGFNKN    249
                     ||:|||.||.:||||:|.||||||||.|||||||||||.|||:|||.||
RBAM_035360__    201 YDETISAYYDKRTNGKRVETWSDQILQFMKQKPRTYLNQYVKDKGFQKN    249


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