Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05827 and RBAM_035360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:20
# Commandline: needle
# -asequence dna-align/BSNT_05827___nfrA.1.9828.seq
# -bsequence dna-align/RBAM_035360___nfrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05827___nfrA-RBAM_035360___nfrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05827___nfrA-RBAM_035360___nfrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05827___nfrA
# 2: RBAM_035360___nfrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 760
# Identity: 590/760 (77.6%)
# Similarity: 590/760 (77.6%)
# Gaps: 20/760 ( 2.6%)
# Score: 2264.0
#
#
#=======================================
BSNT_05827___ 1 ATGAATAACACAATCGAAACCATTTTGAATCATCGGTCAATCCGGTCTTT 50
|||||.||.||.|||||||||||..|.|||||||||||.|||||.||.||
RBAM_035360__ 1 ATGAACAATACCATCGAAACCATACTTAATCATCGGTCGATCCGATCATT 50
BSNT_05827___ 51 TACTGATCAGCTTTTGACAGCTGAAGAAATTGATACATTAGTGAAAAGTG 100
||||||..|||||.|||||||.|||||.||.|||||||||||||||||.|
RBAM_035360__ 51 TACTGACGAGCTTCTGACAGCAGAAGAGATAGATACATTAGTGAAAAGCG 100
BSNT_05827___ 101 CGCAGGCTGCGTCTACATCCAGCTATGTGCAGGCATATTCGATTATCGGG 150
|.|||||.|||||.||.|||||.||.||||||||.||.||.||.|||||.
RBAM_035360__ 101 CCCAGGCGGCGTCAACGTCCAGTTACGTGCAGGCTTACTCCATCATCGGC 150
BSNT_05827___ 151 GTTTCTGATCCTGAGAAAAAACGTGAGCTGTCCGTGCTTGCTGGGAATCA 200
||..|||||...||||||||.||..|||||.|.|..||.||.||.||.||
RBAM_035360__ 151 GTAACTGATAAGGAGAAAAAGCGGAAGCTGGCGGCACTGGCCGGAAACCA 200
BSNT_05827___ 201 GCCTTACGTTGAGAAGAACGGACACTTTTTTGTATTTTGTGCGGATTTGT 250
|||||||||.|||||.|||||.|||||.|||||||||||.||.|||||||
RBAM_035360__ 201 GCCTTACGTCGAGAATAACGGGCACTTGTTTGTATTTTGCGCTGATTTGT 250
BSNT_05827___ 251 ACCGCCATCAACAACTGGCTGAGGAAAAAGGTGAACATATTTCTGAGCTG 300
||||||||.||.||||.||||||||||||||.|||.|.|||.|.|||||.
RBAM_035360__ 251 ACCGCCATAAAAAACTTGCTGAGGAAAAAGGCGAAAACATTACCGAGCTT 300
BSNT_05827___ 301 CTCGAGAATACAGAAATGTTTATGGTTAGCTTGATTGATGCGGCGCTGGC 350
||.||||||||.||||||||||||||.|||.|.||||||||.||.||.||
RBAM_035360__ 301 CTTGAGAATACGGAAATGTTTATGGTCAGCGTCATTGATGCCGCACTTGC 350
BSNT_05827___ 351 AGCGCAAAATATGAGCATTGCCGCTGAATCCATGGGGCTTGGCATTTGCT 400
.||.|||||..|.||..|||||||.|||||.|||||.|||||||||||.|
RBAM_035360__ 351 CGCACAAAACGTAAGTGTTGCCGCGGAATCAATGGGACTTGGCATTTGTT 400
BSNT_05827___ 401 ATATCGGCGGCATTCGGAATGAACTGGACAAGGTGACAGAGGTGCTGCAA 450
|||||||.||||||||.||||||||.||..|||||||.||.|||||...|
RBAM_035360__ 401 ATATCGGAGGCATTCGAAATGAACTTGATCAGGTGACGGAAGTGCTTGGA 450
BSNT_05827___ 451 ACGCCTGACCATGTGCTCCCGCTTTTCGGACTGGCAGTAGGCCATCCTGC 500
|||||||||||||||||.|||||.|||||..|||.|||.||.|||||.||
RBAM_035360__ 451 ACGCCTGACCATGTGCTGCCGCTGTTCGGCTTGGTAGTCGGTCATCCCGC 500
BSNT_05827___ 501 GAACCTTTCCGGCAAAAAACCGAGATTGCCAAAGCAGGCCGTTTATCATG 550
..|.|..|||||..||||.|||.|..||||.||.||.|||||.|||||||
RBAM_035360__ 501 TCATCCGTCCGGTCAAAAGCCGCGCCTGCCGAAACAAGCCGTATATCATG 550
BSNT_05827___ 551 AGAATACGTA------TAATG-TGAACACAGACGATTTCCGTCA--TACT 591
|.||.||||| .|||| .|||||| ||||| || || |
RBAM_035360__ 551 AAAACACGTACGATACGAATGAAGAACAC-------TTCCG-CAGTTA-T 591
BSNT_05827___ 592 ATGAATACGTATGACAAAACCATTTCTGATTACTATAGAGAAA-GAACAA 640
|||||....|||||..||||||||||.|.|||.||| ||.||| |.||||
RBAM_035360__ 592 ATGAAGGAATATGATGAAACCATTTCCGCTTATTAT-GATAAACGGACAA 640
BSNT_05827___ 641 ACGGGCAGCGGGAAGAAACGTGGTCCGATCAAATACTGAACTTTATGAAG 690
||||..||||||..|||||||||||.||||||||.|||.|.||.|||||.
RBAM_035360__ 641 ACGGCAAGCGGGTTGAAACGTGGTCTGATCAAATCCTGCAGTTCATGAAA 690
BSNT_05827___ 691 CAAAAGCCGCGTACGTATTTAAATGACTACGTGAAAGAAAAGGGCTTTAA 740
|||||.|||.|.||.|||||||||.|.||.||.|||||.||.||.|||.|
RBAM_035360__ 691 CAAAAACCGAGAACCTATTTAAATCAATATGTAAAAGATAAAGGTTTTCA 740
BSNT_05827___ 741 TAAAAACTAA 750
.||.||.|||
RBAM_035360__ 741 AAAGAATTAA 750
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