Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05813 and RBAM_035210
See
DNA alignment /
Visit
BSNT_05813 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:19
# Commandline: needle
# -asequence pep-align/BSNT_05813___ung.1.9828.seq
# -bsequence pep-align/RBAM_035210___ung.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05813___ung-RBAM_035210___ung.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05813___ung-RBAM_035210___ung.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05813___ung
# 2: RBAM_035210___ung
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 199/227 (87.7%)
# Similarity: 214/227 (94.3%)
# Gaps: 2/227 ( 0.9%)
# Score: 1102.0
#
#
#=======================================
BSNT_05813___ 1 MKQLLQDSWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALH 50
|||||:||||||||:||:||||||||||||:||:.|||||||.|||||||
RBAM_035210__ 1 MKQLLKDSWWNQLKDEFDKPYYQELREMLKQEYSSQTIYPDSHDIFNALH 50
BSNT_05813___ 51 YTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQD 100
||.|:|||.||||||||||||||.||||||:|||:|||||||||:|||.|
RBAM_035210__ 51 YTPYEDVKAVILGQDPYHGPGQAHGLSFSVQPGVRQPPSLKNIFIELQDD 100
BSNT_05813___ 101 IGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIID 150
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_035210__ 101 IGCSVPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIID 150
BSNT_05813___ 151 VLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGS 200
|::|||:|::||||||||||||||||||||.|||||||||||||||||||
RBAM_035210__ 151 VVNEREKPIVFILWGRHAQMKKERIDTSKHIIIESTHPSPFSARNGFFGS 200
BSNT_05813___ 201 RPFSRANAYLEKMGEAPIDWCIKDL-- 225
|||||.||.||||||.||||||.||
RBAM_035210__ 201 RPFSRTNAALEKMGEQPIDWCIPDLPQ 227
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.