Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05813 and RBAM_035210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:19
# Commandline: needle
# -asequence dna-align/BSNT_05813___ung.1.9828.seq
# -bsequence dna-align/RBAM_035210___ung.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05813___ung-RBAM_035210___ung.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05813___ung-RBAM_035210___ung.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05813___ung
# 2: RBAM_035210___ung
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 686
# Identity: 539/686 (78.6%)
# Similarity: 539/686 (78.6%)
# Gaps: 10/686 ( 1.5%)
# Score: 2104.0
#
#
#=======================================
BSNT_05813___ 1 TTGAAACAGCTTTTACAAGACAGCTGGTGGAATCAGCTAAAGGAAGAGTT 50
|||||||||||||||.||||||||||||||||||||||.||.||.||.||
RBAM_035210__ 1 TTGAAACAGCTTTTAAAAGACAGCTGGTGGAATCAGCTGAAAGATGAATT 50
BSNT_05813___ 51 TGAGAAACCGTATTATCAAGAGCTCAGAGAAATGCTGAAGCGGGAATAC- 99
|||.||||||||||||||||||||.||||||||||||||.|..||||||
RBAM_035210__ 51 TGACAAACCGTATTATCAAGAGCTGAGAGAAATGCTGAAACAAGAATACA 100
BSNT_05813___ 100 GCGGAG-CAAACGATTTATCCGGACAGCCGGGATATTTTCAATGCGCTGC 148
|| || ||||||||||||||.|||||||..||||||||.||.||..|||
RBAM_035210__ 101 GC--AGCCAAACGATTTATCCTGACAGCCATGATATTTTTAACGCCTTGC 148
BSNT_05813___ 149 ATTATACATCATATGATGATGTCAAGGTCGTCATTCTGGGACAAGATCCG 198
|||||||..|.|||||.|||||.||.|..||||||||.|||||.||.|||
RBAM_035210__ 149 ATTATACGCCCTATGAGGATGTAAAAGCGGTCATTCTCGGACAGGACCCG 198
BSNT_05813___ 199 TATCACGGGCCGGGACAGGCTCAAGGTTTAAGCTTCTCTGTCAAGCCCGG 248
|||||||||||.||||||||.||.||..|.||.||.||.||..|||||||
RBAM_035210__ 199 TATCACGGGCCAGGACAGGCGCACGGGCTTAGTTTTTCCGTTCAGCCCGG 248
BSNT_05813___ 249 TGTAAAGCAGCCGCCTTCGTTAAAAAATATTTTTCTTGAGCTGCAGCAGG 298
.||.|.|||||||||.||.||.|||||||||||..|.|||||.|||.|.|
RBAM_035210__ 249 GGTCAGGCAGCCGCCGTCTTTGAAAAATATTTTCATAGAGCTTCAGGACG 298
BSNT_05813___ 299 ATATCGGGTGCAGCATCCCGAATCACGGGTCGCTTGTGAGCTGGGCAAAG 348
|||||||.|||..|.|.||.||.|||||.|||||.||.||||||||.|||
RBAM_035210__ 299 ATATCGGCTGCTCCGTACCAAACCACGGATCGCTCGTCAGCTGGGCGAAG 348
BSNT_05813___ 349 CAAGGCGTTCTTTTGCTGAATACTGTGCTGACAGTAAGGCGCGGACAGGC 398
||.||.||.||||||.|.||.||.|||||.||.||..|.|||||.|||||
RBAM_035210__ 349 CAGGGAGTGCTTTTGTTAAACACAGTGCTTACGGTTCGCCGCGGTCAGGC 398
BSNT_05813___ 399 GAATTCCCATAAGGGAAAAGGCTGGGAGCGACTGACGGACCGAATTATTG 448
.||||||||.||.||.||.||.||||||||.||.||.|||||.||.||||
RBAM_035210__ 399 CAATTCCCACAAAGGCAAGGGATGGGAGCGGCTCACTGACCGCATCATTG 448
BSNT_05813___ 449 ACGTGCTGAGTGAAAGAGAGCGGCCGGTTATCTTTATTTTGTGGGGACGG 498
|.|||.|||.||||||||||..||||.||.|||||||..|.|||||.||.
RBAM_035210__ 449 ATGTGGTGAATGAAAGAGAGAAGCCGATTGTCTTTATCCTATGGGGGCGT 498
BSNT_05813___ 499 CATGCTCAAATGAAAAAAGAACGGATCGACACCTCCAAGCATTTTATCAT 548
||.||.||.|||||||||||.||.||.|||||.||.||.||..||||.||
RBAM_035210__ 499 CACGCGCAGATGAAAAAAGAGCGCATTGACACATCGAAACACATTATTAT 548
BSNT_05813___ 549 TGAATCGACGCATCCCAGCCCGTTTTCTGCGAGAAACGGATTTTTCGGGA 598
|||||||||.|||||.|||||||||||.||.||.|||||.||||||||||
RBAM_035210__ 549 TGAATCGACTCATCCGAGCCCGTTTTCGGCAAGGAACGGTTTTTTCGGGA 598
BSNT_05813___ 599 GCAGACCGTTTTCCCGGGCGAATGCCTATTTGGAGAAAATGGGAGAGGCG 648
||||||||||||||||..|.||.|||....|.||.||||||||.|||..|
RBAM_035210__ 599 GCAGACCGTTTTCCCGTACAAACGCCGCCCTTGAAAAAATGGGGGAGCAG 648
BSNT_05813___ 649 CCGATTGATTGGTGTATTAAGGATTTG------TAA 678
|||||.||||||||.||....||..|| |||
RBAM_035210__ 649 CCGATCGATTGGTGCATCCCCGACCTGCCGCAATAA 684
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