Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05809 and RBAM_035200

See DNA alignment / Visit BSNT_05809 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:19
# Commandline: needle
#    -asequence pep-align/BSNT_05809___ywdI.1.9828.seq
#    -bsequence pep-align/RBAM_035200___ywdI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05809___ywdI-RBAM_035200___ywdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05809___ywdI-RBAM_035200___ywdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05809___ywdI
# 2: RBAM_035200___ywdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      65/108 (60.2%)
# Similarity:    85/108 (78.7%)
# Gaps:           3/108 ( 2.8%)
# Score: 339.0
# 
#
#=======================================

BSNT_05809___      1 MNIHISALIQKMEEELKKAKTAERDEELKRYVAVVRSLCDVVLDQPENVS     50
                     ||||||||||||||||::||||.|.||:|.:.|.:||||||||....:.:
RBAM_035200__      1 MNIHISALIQKMEEELRQAKTATRTEEVKMHAAAIRSLCDVVLGTQTHTA     50

BSNT_05809___     51 APRIQ---PSVTPSPAAPPSTDQLMMEKMMGSAGLNKFRKQEKEKQEEDG     97
                     ...:|   |...|.|:|.||||.|::||||||||||:::|:.|:::||||
RBAM_035200__     51 PAPVQNPIPKAAPKPSASPSTDPLLLEKMMGSAGLNQYQKKAKDEREEDG    100

BSNT_05809___     98 NGESLFDF    105
                     ||:|:|||
RBAM_035200__    101 NGDSIFDF    108


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