Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05806 and RBAM_035180

See DNA alignment / Visit BSNT_05806 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:19
# Commandline: needle
#    -asequence pep-align/BSNT_05806___ywdK.1.9828.seq
#    -bsequence pep-align/RBAM_035180___ywdK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05806___ywdK-RBAM_035180___ywdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05806___ywdK-RBAM_035180___ywdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05806___ywdK
# 2: RBAM_035180___ywdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:     115/123 (93.5%)
# Similarity:   119/123 (96.7%)
# Gaps:           0/123 ( 0.0%)
# Score: 588.0
# 
#
#=======================================

BSNT_05806___      1 MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHAL     50
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_035180__      1 MKVFIILGAINALLAVALGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHAL     50

BSNT_05806___     51 GLFVVAFLADKLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAI    100
                     ||.||||||:||||.|||:.|||||||||||||||||:||||||||||||
RBAM_035180__     51 GLLVVAFLAEKLSGAGSVSVAGWLMFAGIVLFSGSLYVLSVTQISILGAI    100

BSNT_05806___    101 TPLGGVAFIISWIMIVVAAVKYL    123
                     |||||||||||||||:|||||||
RBAM_035180__    101 TPLGGVAFIISWIMIIVAAVKYL    123


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