Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05801 and RBAM_035160

See DNA alignment / Visit BSNT_05801 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:18
# Commandline: needle
#    -asequence pep-align/BSNT_05801___spsA.1.9828.seq
#    -bsequence pep-align/RBAM_035160___spsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05801___spsA-RBAM_035160___spsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05801___spsA-RBAM_035160___spsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05801___spsA
# 2: RBAM_035160___spsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     211/256 (82.4%)
# Similarity:   232/256 (90.6%)
# Gaps:           0/256 ( 0.0%)
# Score: 1139.0
# 
#
#=======================================

BSNT_05801___      1 MPKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIR     50
                     ||||||||||||||||||:||.|||||||:|||||||||||||.||..||
RBAM_035160__      1 MPKVSVIMTSYNKSDYVARSIKSILSQTFTDFELFIMDDNSNEATLAEIR     50

BSNT_05801___     51 PFLNDNRVRFYQSDVSGVKERTEKTRYAALINQAIEMAEGEYITYATDDN    100
                     |||.|:||||||||||||||||||||||||||||||||||||:|||||||
RBAM_035160__     51 PFLTDDRVRFYQSDVSGVKERTEKTRYAALINQAIEMAEGEYVTYATDDN    100

BSNT_05801___    101 IYMPDRLLKMVQELDTHSEKAVIYSASKTYHLNENRDIVKETVRPAAQVT    150
                     .|:|:||.|||:|||...||||:||:|||||||:.::.||||.|||.::.
RBAM_035160__    101 TYVPERLEKMVKELDEDPEKAVVYSSSKTYHLNQRKETVKETARPAERIV    150

BSNT_05801___    151 WNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH    200
                     |||||||||||||||:||||:||..|||||||||||||||||||||||||
RBAM_035160__    151 WNAPCAIDHCSVMHRFSVLEQVKSAFGSYWDESPAFYRIGDARFFWRVNH    200

BSNT_05801___    201 FYPFYPLDEELDLNYITDQSIHFQLFESEKNEFVRNLPPQRNCRELRESL    250
                     ||||||:.||||:|||||||||:|||.:||||||.:||.|..||||||||
RBAM_035160__    201 FYPFYPISEELDINYITDQSIHYQLFAAEKNEFVNSLPQQTTCRELRESL    250

BSNT_05801___    251 KKLGMG    256
                     ||||.|
RBAM_035160__    251 KKLGKG    256


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