Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05794 and RBAM_035120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:18
# Commandline: needle
# -asequence pep-align/BSNT_05794.1.9828.seq
# -bsequence pep-align/RBAM_035120___spsE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05794-RBAM_035120___spsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05794-RBAM_035120___spsE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05794
# 2: RBAM_035120___spsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 255/373 (68.4%)
# Similarity: 282/373 (75.6%)
# Gaps: 58/373 (15.5%)
# Score: 1345.0
#
#
#=======================================
BSNT_05794 0 -------------------------------------------------- 0
RBAM_035120__ 1 MASCQIGTKSIGEGSPVFIIAEAGINHDGKLSQAFELIDAASEAGADAVK 50
BSNT_05794 1 --------MYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCRE 42
|||||||||||||||:|||||||||||||||||.|||:||::
RBAM_035120__ 51 FQMFQADKMYQKDPGLYKTAAGKNVSIFSLVQSMEMPAEWIEPLLEYCKK 100
BSNT_05794 43 KQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMI 92
|.|:||||||||||||||.:||||||||||||:||||||||||.|..|:|
RBAM_035120__ 101 KGVLFLSTVCDEGSADLLYATSPSAFKIASYELNHLPLLKYVAGLKTPII 150
BSNT_05794 93 FSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPML 142
||||||:|||:.||::||..|||.:|||||||||||||||||||||||||
RBAM_035120__ 151 FSTAGADISDIQEAYQTITGEGNTEIAIMHCVAKYPAPPEYSNLSVIPML 200
BSNT_05794 143 AAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKDLPGADHSF 192
|||||:|||||||||.||.:.||||||||||||||||||||:||||||||
RBAM_035120__ 201 AAAFPDAVIGFSDHSAHPYDVPCAAVRLGAKLIEKHFTIDKNLPGADHSF 250
BSNT_05794 193 ALNPDELKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTTSIEGEIRN 242
|||||||||||..||..||||:||...||.|.|.|||:||||.|||:||.
RBAM_035120__ 251 ALNPDELKEMVAAIRSVEAELRQGHHAPVPEVLSGSSHKTTTPIEGDIRR 300
BSNT_05794 243 FAYRGIFTTAPIQKGEAFSEDNIAVLRPGQKPQGLHPRFFELLTSGVRAV 292
|||||||:||||||||.|:.:|:|||||||||||||||:|||||.|.|||
RBAM_035120__ 301 FAYRGIFSTAPIQKGECFTAENLAVLRPGQKPQGLHPRYFELLTDGARAV 350
BSNT_05794 293 RDIPADTGIVWDDILLKDSPFHE 315
|||||||||.|||:|.|.||:.:
RBAM_035120__ 351 RDIPADTGITWDDLLTKGSPYDD 373
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