Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05794 and RBAM_035120
See
Amino acid alignment /
Visit
BSNT_05794 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:18
# Commandline: needle
# -asequence dna-align/BSNT_05794.1.9828.seq
# -bsequence dna-align/RBAM_035120___spsE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05794-RBAM_035120___spsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05794-RBAM_035120___spsE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05794
# 2: RBAM_035120___spsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1144
# Identity: 723/1144 (63.2%)
# Similarity: 723/1144 (63.2%)
# Gaps: 218/1144 (19.1%)
# Score: 2600.5
#
#
#=======================================
BSNT_05794 0 -------------------------------------------------- 0
RBAM_035120__ 1 ATGGCATCATGCCAAATCGGAACGAAGTCAATCGGCGAAGGTTCGCCCGT 50
BSNT_05794 0 -------------------------------------------------- 0
RBAM_035120__ 51 ATTCATCATCGCCGAAGCCGGAATTAATCATGACGGAAAACTGAGCCAGG 100
BSNT_05794 0 -------------------------------------------------- 0
RBAM_035120__ 101 CGTTTGAATTGATAGATGCGGCCAGTGAGGCCGGCGCGGACGCGGTCAAG 150
BSNT_05794 1 ------------------------ATGTACCAGAAAGATCCTGGTTTGTA 26
|||||.||||||||.||.||.|||||
RBAM_035120__ 151 TTCCAAATGTTTCAGGCTGACAAAATGTATCAGAAAGACCCCGGCTTGTA 200
BSNT_05794 27 CAAGACGGCAGCGGGCAAGGACGTCTCTATTTTTTCTTTGGTTCAATCTA 76
|||.||.||.|||||.||..||||||||||||||||||||||.|||||.|
RBAM_035120__ 201 CAAAACCGCTGCGGGAAAAAACGTCTCTATTTTTTCTTTGGTGCAATCAA 250
BSNT_05794 77 TGGAAATGCCTGCTGAGTGGATTTTACCGCTATTGGATTACTGCCGCGAA 126
||||||||||.||.||.|||||...||||||..|.||.||.|| ...|||
RBAM_035120__ 251 TGGAAATGCCCGCCGAATGGATCGAACCGCTGCTTGAATATTG-TAAGAA 299
BSNT_05794 127 AA---GCAGGTGATCTTTTTAAGTACGGTATGTGACGAGGGGTCAGCTGA 173
|| || |||.|.||||||||.|||||.||||||||.||.||.||.||
RBAM_035120__ 300 AAAAGGC--GTGCTGTTTTTAAGCACGGTCTGTGACGAAGGCTCTGCCGA 347
BSNT_05794 174 TCTGCTT-CAGT---CTACCTCGCCGAGCGCTTTTAAAATCGCATCCTAT 219
||| |.|| |.||.||.||....||.|||||||||||.|||||.
RBAM_035120__ 348 ----CTTACTGTATGCGACTTCCCCTTCAGCCTTTAAAATCGCCTCCTAC 393
BSNT_05794 220 GAAATTAACCATCTCCCGCTGCTCAAATATGTCGCCCGGCTGAACAGGCC 269
||..|.||.|||||.|||.|..|.|||||||||||..|||||||.|..||
RBAM_035120__ 394 GAGCTGAATCATCTGCCGTTATTGAAATATGTCGCGGGGCTGAAGACACC 443
BSNT_05794 270 GATGATTTTCTCGACAGCCGGAGCTGAAATCTCTGATGTTCACGAAGCTT 319
|||.||.||.||.||.||.||.|||||.||.||.|||.||||.||.||||
RBAM_035120__ 444 GATTATCTTTTCCACCGCGGGTGCTGATATTTCAGATATTCAGGAGGCTT 493
BSNT_05794 320 GGCGCACCATCA-GGGCAGAGGGAAACAATCAAATTGCCATAATGCATTG 368
..|..|||||.| .||| |||||.||||...|||||||.||.||||||||
RBAM_035120__ 494 ATCAAACCATTACCGGC-GAGGGGAACACAGAAATTGCGATCATGCATTG 542
BSNT_05794 369 TGTGGCGAAATACCCAGCACCGCCGGAGTACAGCAACCTCAGCGTCATTC 418
||||||||||||.||.||.|||||.||.||||||||.||.||||||||||
RBAM_035120__ 543 TGTGGCGAAATATCCCGCGCCGCCTGAATACAGCAATCTGAGCGTCATTC 592
BSNT_05794 419 CGATGCTTGCCGCCGCTTTTCCTGAGGCAGTAATCGGCTTCTCCGATCAT 468
|.||||||||||||||.||.||.||.||.||.|||||.|||||||||||.
RBAM_035120__ 593 CCATGCTTGCCGCCGCATTCCCGGATGCTGTGATCGGTTTCTCCGATCAC 642
BSNT_05794 469 AGCGAGCATCCGACAGAAGCGCCATGTGCCGCGGTTCGGCTCGGAGCAAA 518
||||..||||||...||.|.|||.||.||.||.||..||||||||||.||
RBAM_035120__ 643 AGCGCCCATCCGTATGATGTGCCGTGCGCGGCTGTCAGGCTCGGAGCGAA 692
BSNT_05794 519 ACTGATAGAAAAGCATTTTACGATCGATAAAGATCTGCCGGGTGCCGACC 568
||||||.||||||||||||||||||||||||.|.|||||.|||||.||.|
RBAM_035120__ 693 ACTGATTGAAAAGCATTTTACGATCGATAAAAACCTGCCCGGTGCTGATC 742
BSNT_05794 569 ACTCGTTTGCATTAAATCCGGATGAATTGAAAGAAATGGT-----CGAT- 612
||||.||.||..|.||||||||||||||.||||||||||| ||||
RBAM_035120__ 743 ACTCCTTCGCCCTCAATCCGGATGAATTAAAAGAAATGGTTGCGGCGATC 792
BSNT_05794 613 GGCATCAGGAAAACGGAAGCTGAGCTGAAACAGGGG-ATCACAAAG--CC 659
.|| |||| ..|||||.||||||...|||||| ||||| | ||
RBAM_035120__ 793 CGC-TCAG-----TTGAAGCGGAGCTGCGGCAGGGGCATCAC---GCTCC 833
BSNT_05794 660 GGTCTCTGAAAAACTGCTTGGCAGTTCATACAAAACAACAACCTCCATCG 709
|||..|.|||...|||...||.|||||..|.|||||.||.||..|.||.|
RBAM_035120__ 834 GGTGCCGGAAGTGCTGTCGGGAAGTTCCCATAAAACGACGACACCGATTG 883
BSNT_05794 710 AAGGAGAAATCAGAAATTTTGCATACAGAGGCATTTTTACAACAGCTCCG 759
||||.||.|||||||..||.||.|||||||||||||||.|||||||.|||
RBAM_035120__ 884 AAGGGGATATCAGAAGGTTCGCTTACAGAGGCATTTTTTCAACAGCGCCG 933
BSNT_05794 760 ATTCAAAAAGGTGAAGCCTTTAGTGAAGACAATATCGCAGTGCTTCGGCC 809
|||||||||||.|||...||||..|..||.||..|.||.||.|||||.||
RBAM_035120__ 934 ATTCAAAAAGGCGAATGTTTTACGGCGGAAAACCTTGCCGTCCTTCGTCC 983
BSNT_05794 810 CGGACAAAAGCCGCAGGGGCTGCACCCGAGATTTTTTGAACT----GCTG 855
|||.|||||.|||||||||||.||||||||||.||||||.|| .|||
RBAM_035120__ 984 CGGCCAAAAACCGCAGGGGCTTCACCCGAGATATTTTGAGCTTTTAACTG 1033
BSNT_05794 856 ACCAGCGGTGTTCGGGCTGTAAGAGACATTCCAGCCGACACAGGCATTGT 905
| |||.|..||.||.||.||.||.||.||.||||||||.|||||...
RBAM_035120__ 1034 A----CGGCGCGCGTGCGGTCAGGGATATCCCCGCCGACACGGGCATCAC 1079
BSNT_05794 906 CTGGGATGACATTTT-ACTGAAGGACAGCCCGTTTCATGAATGA 948
.|||||||||.|||| || |||.|.||||||.|.|.||||.|||
RBAM_035120__ 1080 TTGGGATGACCTTTTGAC-GAAAGGCAGCCCATATGATGACTGA 1122
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.