Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05791 and RBAM_035090

See DNA alignment / Visit BSNT_05791 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:18
# Commandline: needle
#    -asequence pep-align/BSNT_05791___spsI.1.9828.seq
#    -bsequence pep-align/RBAM_035090___spsI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05791___spsI-RBAM_035090___spsI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05791___spsI-RBAM_035090___spsI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05791___spsI
# 2: RBAM_035090___spsI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     217/246 (88.2%)
# Similarity:   233/246 (94.7%)
# Gaps:           1/246 ( 0.4%)
# Score: 1143.0
# 
#
#=======================================

BSNT_05791___      1 MKGVILAGGNGSRLMPLTKAVNKHLLPVGPYPMIYWSIMKLEEAGIKDIL     50
                     |||||||||.|||||||||||||||||||||||||||:||||||||.|||
RBAM_035090__      1 MKGVILAGGTGSRLMPLTKAVNKHLLPVGPYPMIYWSVMKLEEAGITDIL     50

BSNT_05791___     51 LISQKEHMPQFYKLLGNGEELGVTITYQVQPAASGISDGLSYAKRFTKKE    100
                     ||:|||::|||:|||..||||||:|||||||||||||||||||||||.::
RBAM_035090__     51 LITQKEYIPQFHKLLETGEELGVSITYQVQPAASGISDGLSYAKRFTGRD    100

BSNT_05791___    101 SFILLLGDNIFEDSLKPYTERFEQQGKGAKVLLKEVDDPERFGIAEIDEK    150
                     .|:|||||||||||||||||||.:||||||||||||||||||||||||||
RBAM_035090__    101 PFVLLLGDNIFEDSLKPYTERFAKQGKGAKVLLKEVDDPERFGIAEIDEK    150

BSNT_05791___    151 NKRIRSIIEKPEQPPTNLCVTGIYMYDAEVFSYIEQISPSKRGELEITDV    200
                     ||||:|||||||||||.|||||||||||||||||||||||||||||||||
RBAM_035090__    151 NKRIKSIIEKPEQPPTRLCVTGIYMYDAEVFSYIEQISPSKRGELEITDV    200

BSNT_05791___    201 NNLYIENSQLTYDVLSGWWVDAGTHESLYLASQLVHQALRKGQDEK    246
                     ||||||:|:||||||:|||||||||||||||..|.||||:|||:. 
RBAM_035090__    201 NNLYIEHSELTYDVLTGWWVDAGTHESLYLAGSLAHQALQKGQEH-    245


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