Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05789 and RBAM_035070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:17
# Commandline: needle
# -asequence pep-align/BSNT_05789___spsK.1.9828.seq
# -bsequence pep-align/RBAM_035070___spsK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05789___spsK-RBAM_035070___spsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05789___spsK-RBAM_035070___spsK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05789___spsK
# 2: RBAM_035070___spsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 211/283 (74.6%)
# Similarity: 240/283 (84.8%)
# Gaps: 1/283 ( 0.4%)
# Score: 1130.0
#
#
#=======================================
BSNT_05789___ 1 MTKVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGH 50
|||||||||.||||.||||||||.|||||||||.||||:|||||||||.|
RBAM_035070__ 1 MTKVLVTGAAGQLGRELCRQLKQEGYEVIALTKAMMNISDQRSVRHSFSH 50
BSNT_05789___ 51 YQPDIVVNSAAFTSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHI 100
|:||||||:||:||||:||.|||||||:|||||||.|||:...||:::||
RBAM_035070__ 51 YKPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEAENTGAKFIHI 100
BSNT_05789___ 101 STDYVFNGKGTQPYREDDPLDPKTIYGKSKRLGEELIRLTTKDSTIIRTS 150
||||||:||||:||:.|||.||.|||||||:|||||||||.|:.||||||
RBAM_035070__ 101 STDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTS 150
BSNT_05789___ 151 WVYGHGGSNFVETMLKFAETKQELRVVSDQIGSPTYTKDLAEAVIKLFSH 200
||||.||.|||.||||.|:|..::|||:||:|:|||||||||.||.||..
RBAM_035070__ 151 WVYGSGGHNFVNTMLKLADTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
BSNT_05789___ 201 PPGIYHVSNSGICSWYEFAMAIMEESGLETAILPVTTEEYGNKTPRPAYS 250
|||:||.:|||:|||||||.||.||||...|:||||||||||:|||||||
RBAM_035070__ 201 PPGLYHAANSGVCSWYEFAKAIFEESGRTAAVLPVTTEEYGNETPRPAYS 250
BSNT_05789___ 251 VLSHRAIEEAGIRPRHWREALREYLQERSSTCD 283
|||..:||..|:..|||||||.:||| |...|.
RBAM_035070__ 251 VLSLESIERQGLGMRHWREALHDYLQ-REGQCK 282
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