Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00454 and RBAM_035000

See DNA alignment / Visit BSNT_00454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:12
# Commandline: needle
#    -asequence pep-align/BSNT_00454.1.9828.seq
#    -bsequence pep-align/RBAM_035000.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00454-RBAM_035000.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00454-RBAM_035000.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00454
# 2: RBAM_035000
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     134/311 (43.1%)
# Similarity:   214/311 (68.8%)
# Gaps:           0/311 ( 0.0%)
# Score: 701.0
# 
#
#=======================================

BSNT_00454         1 MTVLWVAAVIALACLNVIQFIMKKKRDGNLAYTADQLSYMLSRDSAGQVL     50
                     |..:.|...|..|.:|:..|..:......:.|..::|..:::.::..::|
RBAM_035000        1 MFYMLVILFICSAAVNIFLFRSRLNLRTEIKYIRNKLRKVVNEETGERLL     50

BSNT_00454        51 LPTDDHTLKGLLVNINLIVENRQQISAQFAKTEQSMKRMLTNMSHDLKTP    100
                     |.|:|..:|.||:.||.::::.|:|.......|.||::||:|:|||||||
RBAM_035000       51 LNTEDKYIKSLLIQINRLLDHNQKIKGNCNSIELSMRKMLSNISHDLKTP    100

BSNT_00454       101 LTVILGYIEAIQSDPNMPDEERERLLEKLRQKTNELIQMINSFFDLAKLE    150
                     |||||||||.|.:|.::..|:...||:.:..||.|::.:||.||:|.|||
RBAM_035000      101 LTVILGYIEIINNDKSLTSEKVMSLLKTVNLKTVEVLALINRFFELVKLE    150

BSNT_00454       151 SEDKEIPITKVHMNDICKRNILHYYDAVQSKGFQAAIDIPDTPVYAQANE    200
                     |.||::..:::.:.::.::.||.||:.:.||.|:..|||||..|:...:|
RBAM_035000      151 SGDKKLNSSRIDICEVSRKIILDYYEILISKEFEVVIDIPDDSVFVSGDE    200

BSNT_00454       201 EALDRILQNLLSNAIQYGAAGKLIGLTLSYDERNIAITVWDRGKGISETD    250
                     :|::|:|.||::||||||:.||::||.:...:.::.:.:.|:||||:|..
RBAM_035000      201 DAIERVLNNLITNAIQYGSDGKMVGLKIRITDNDVFVEISDKGKGINEMH    250

BSNT_00454       251 QQRVFERLYTLEESRNKAFQGSGLGLTITKRLTEKMGGTISVQSKPYERT    300
                     :.|||||:||||:|||..:|||||||||||||.|:|||.||:.|.|:|:|
RBAM_035000      251 KDRVFERMYTLEDSRNTNYQGSGLGLTITKRLVEQMGGGISLDSVPFEKT    300

BSNT_00454       301 AFTITLKRMTY    311
                     .|::.|||:.:
RBAM_035000      301 IFSVRLKRIRF    311


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