Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05778 and RBAM_034960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:17
# Commandline: needle
# -asequence pep-align/BSNT_05778___rocC.1.9828.seq
# -bsequence pep-align/RBAM_034960___rocC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05778___rocC-RBAM_034960___rocC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05778___rocC-RBAM_034960___rocC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05778___rocC
# 2: RBAM_034960___rocC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 381/473 (80.5%)
# Similarity: 424/473 (89.6%)
# Gaps: 3/473 ( 0.6%)
# Score: 2012.5
#
#
#=======================================
BSNT_05778___ 1 MMQNHKN--ELQRSMKSRHLFMIALGGVIGTGLFLGSGFTISQAGPLGAI 48
||...| ||||:||.|||||||||||||||||||||||||:|||:|||
RBAM_034960__ 1 -MQGDTNQTELQRTMKGRHLFMIALGGVIGTGLFLGSGFTISEAGPIGAI 49
BSNT_05778___ 49 AAYIIGGFLMYLVMLCLGELAVAMPVAGSFQAYATKFLGPSTGFMIGWLY 98
.||:||||||||||||||||||||||||||||||.|||||||||.|||:|
RBAM_034960__ 50 LAYVIGGFLMYLVMLCLGELAVAMPVAGSFQAYAAKFLGPSTGFTIGWMY 99
BSNT_05778___ 99 WFSWANTVGLELTSAGILMQRWLPSVPIWIWCLVFGIVIFLINALSVRSF 148
.|||||||||||||||||||||.|:||||:||||||:|||.|||||.|||
RBAM_034960__ 100 AFSWANTVGLELTSAGILMQRWFPAVPIWVWCLVFGVVIFSINALSARSF 149
BSNT_05778___ 149 AEMEFWFSSIKVAAIILFIVIGGAAVFGLIDFKGGQETPFLSNFMTDRGL 198
||||||||||||.||:|||::|.|||||.:.|.|||..|:||||.||:||
RBAM_034960__ 150 AEMEFWFSSIKVMAIVLFIILGCAAVFGFVGFNGGQTAPYLSNFTTDKGL 199
BSNT_05778___ 199 FPNGVLAVMFTLVMVNFSFQGTELVGIAAGESESPEKTLPKSIRNVIWRT 248
||||..||:|||||||||||||||||||:||||:||||||:|||||||||
RBAM_034960__ 200 FPNGAQAVLFTLVMVNFSFQGTELVGIASGESENPEKTLPRSIRNVIWRT 249
BSNT_05778___ 249 LFFFVLAMFVLVAILPYKTAGVIESPFVAVLDQIGIPFSADIMNFVILTA 298
||||||||||||:||||:||||||||||||||:||:|::|||||||||||
RBAM_034960__ 250 LFFFVLAMFVLVSILPYQTAGVIESPFVAVLDKIGVPYAADIMNFVILTA 299
BSNT_05778___ 299 ILSVANSGLYAASRMMWSLSSNQMGPSFLTRLTKKGVPMNALLITLGISG 348
:||||||||||:||||||||..:|||:.||:|||||||:.||.||:.|||
RBAM_034960__ 300 MLSVANSGLYASSRMMWSLSKTKMGPASLTKLTKKGVPLKALSITIAISG 349
BSNT_05778___ 349 CSLLTSVMAAETVYLWCISISGMVTVVAWMSICASQFFFRRRFLAEGGNV 398
.||||||.||||||:|.||||||:|||||||||||||.|||||||||||:
RBAM_034960__ 350 LSLLTSVFAAETVYVWLISISGMITVVAWMSICASQFVFRRRFLAEGGNL 399
BSNT_05778___ 399 NDLEFRTPLYPLVPILGFCLYGCVLISLIFIPDQRIGLYCGVPIIIFCYA 448
.||.|:|||||:||||||.:||.:|||||||||||||||||||::|.|||
RBAM_034960__ 400 KDLAFKTPLYPIVPILGFSVYGLILISLIFIPDQRIGLYCGVPLMIICYA 449
BSNT_05778___ 449 YYHLSIKKRINHEPIEKKQTEAQ 471
|||..||||:..||...::..|.
RBAM_034960__ 450 YYHFGIKKRLKREPASSEKGAAG 472
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