Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05773 and RBAM_034910

See DNA alignment / Visit BSNT_05773 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:16
# Commandline: needle
#    -asequence pep-align/BSNT_05773___ywfD.1.9828.seq
#    -bsequence pep-align/RBAM_034910___bacC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05773___ywfD-RBAM_034910___bacC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05773___ywfD-RBAM_034910___bacC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05773___ywfD
# 2: RBAM_034910___bacC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     237/255 (92.9%)
# Similarity:   244/255 (95.7%)
# Gaps:           2/255 ( 0.8%)
# Score: 1220.0
# 
#
#=======================================

BSNT_05773___      1 MIMNLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRK     50
                       ||||||||||||||||||||||||||.||||||||||||||||||:||
RBAM_034910__      1 --MNLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRK     48

BSNT_05773___     51 ENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGIEIVAPIHE    100
                     ||||||||||||||||.|||:|:.||...|||||||||||||||||||||
RBAM_034910__     49 ENNDRLHFVQTDITDEPACQNAIRSAADKFGGLDVLINNAGIEIVAPIHE     98

BSNT_05773___    101 MELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPD    150
                     ||||||||||.|||||||||||||||:||.:|||||||||||||:|||||
RBAM_034910__     99 MELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPD    148

BSNT_05773___    151 IPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENN    200
                     |||||||||||||||:|||||||||.||||||||||||||||||||||||
RBAM_034910__    149 IPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENN    198

BSNT_05773___    201 EGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034910__    199 EGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADG    248

BSNT_05773___    251 GYTAQ    255
                     |||||
RBAM_034910__    249 GYTAQ    253


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