Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05767 and RBAM_034870

See DNA alignment / Visit BSNT_05767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:16
# Commandline: needle
#    -asequence pep-align/BSNT_05767___ywfH.1.9828.seq
#    -bsequence pep-align/RBAM_034870___ywfH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05767___ywfH-RBAM_034870___ywfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05767___ywfH-RBAM_034870___ywfH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05767___ywfH
# 2: RBAM_034870___ywfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     215/259 (83.0%)
# Similarity:   242/259 (93.4%)
# Gaps:           0/259 ( 0.0%)
# Score: 1113.0
# 
#
#=======================================

BSNT_05767___      1 MSKRTAFVMGASQGIGKAIALKLADQHFSLVINSRNLDNIESVKEDIFAK     50
                     |||||||:|||||||||||||||||..|..|||||..:|||||||:|.||
RBAM_034870__      1 MSKRTAFIMGASQGIGKAIALKLADNGFHTVINSRVPENIESVKEEILAK     50

BSNT_05767___     51 HPEASVIVLAGDMSDRHTRAGIFQEIESQCGRLDVLINNIPGGAPDTFDN    100
                     ||:|.|.||||||||:.||||||:||.||||||||||||||||:||||:|
RBAM_034870__     51 HPDAGVTVLAGDMSDQKTRAGIFEEIRSQCGRLDVLINNIPGGSPDTFEN    100

BSNT_05767___    101 CNIDDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINIVGNLWKEPGAN    150
                     |:|:|||.|||.||:||||::|.|:::|||:|||||||||||||||||||
RBAM_034870__    101 CDIEDMTNTFTNKTIAYIDSMKTAAAIMKQHEFGRIINIVGNLWKEPGAN    150

BSNT_05767___    151 MFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVM    200
                     ||||||||||||||||||:|||||.:||||||||||||||||||||:|||
RBAM_034870__    151 MFTNSMMNAALINASKNIAIQLAPFHITVNCLNPGFIATDRYHQFVKNVM    200

BSNT_05767___    201 KKNSISKQKAEEQVASGIPMKRVGSAEETAALAAFLASEEASYITGQQIS    250
                     |:|.|||.:|||::|||:||||||:|||||||||||||||||||||||:|
RBAM_034870__    201 KQNGISKAEAEERIASGVPMKRVGTAEETAALAAFLASEEASYITGQQVS    250

BSNT_05767___    251 ADGGSMKSI    259
                     |||||||||
RBAM_034870__    251 ADGGSMKSI    259


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