Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05742 and RBAM_034680

See DNA alignment / Visit BSNT_05742 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence pep-align/BSNT_05742___ywhA.1.9828.seq
#    -bsequence pep-align/RBAM_034680___ywhA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05742___ywhA-RBAM_034680___ywhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05742___ywhA-RBAM_034680___ywhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05742___ywhA
# 2: RBAM_034680___ywhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     106/139 (76.3%)
# Similarity:   125/139 (89.9%)
# Gaps:           0/139 ( 0.0%)
# Score: 561.0
# 
#
#=======================================

BSNT_05742___      1 MDHDKLEANLLDHALTKYLKSTKQLDEATVPKHVNNVRGFILRIIYRHGS     50
                     |.||.|:||:||:||||||||||:|||||:||.:||:||||||||||||:
RBAM_034680__      1 MKHDILQANVLDYALTKYLKSTKKLDEATIPKSINNIRGFILRIIYRHGT     50

BSNT_05742___     51 CTIKDILKEVTLSPSATTTALNHLEQEGFIERSRNNNDRRTVWITLSESG    100
                     |||||||:|||||||||||||||||:|||:||||||.||||||:||||||
RBAM_034680__     51 CTIKDILQEVTLSPSATTTALNHLEKEGFVERSRNNEDRRTVWMTLSESG    100

BSNT_05742___    101 RGAAEQMIENRQQLIDGMFERLTAEEKETFLAIIAKLAQ    139
                     :.||.|||||||.|||.:||.||.|||.||.:::.|:.:
RBAM_034680__    101 KMAAMQMIENRQMLIDELFEALTEEEKNTFFSLVEKVMK    139


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