Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05732 and RBAM_034610

See DNA alignment / Visit BSNT_05732 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence pep-align/BSNT_05732___speB.1.9828.seq
#    -bsequence pep-align/RBAM_034610___speB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05732___speB-RBAM_034610___speB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05732___speB-RBAM_034610___speB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05732___speB
# 2: RBAM_034610___speB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     278/290 (95.9%)
# Similarity:   287/290 (99.0%)
# Gaps:           0/290 ( 0.0%)
# Score: 1474.0
# 
#
#=======================================

BSNT_05732___      1 MRFDEAYSGKVFIASRPEWEEADAILYGMPMDWTVSYRPGSRFGPSRIRE     50
                     |||||||||||||||||:|:|||||||||||||||||||||||||.||||
RBAM_034610__      1 MRFDEAYSGKVFIASRPDWKEADAILYGMPMDWTVSYRPGSRFGPGRIRE     50

BSNT_05732___     51 VSIGLEEYSPYLDRDLADLNFFDAGDIPLPFGNPQRSLDMIEEYVDSILE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034610__     51 VSIGLEEYSPYLDRDLADLNFFDAGDIPLPFGNPQRSLDMIEEYVDSILE    100

BSNT_05732___    101 KGKFPMGMGGEHLVSWPVIKAMYKKYPDLAIIHFDAHTDLRVDYEGEPLS    150
                     |||||:|||||||||||||||||||:|||||||||||||||.||||||||
RBAM_034610__    101 KGKFPLGMGGEHLVSWPVIKAMYKKFPDLAIIHFDAHTDLRTDYEGEPLS    150

BSNT_05732___    151 HSTPIRKAAELIGPHNVYSFGIRSGMKEEFEWAKENGMHISKFEVLEPLK    200
                     ||||||||||||||.||:||||||||||||||||||||||||||||||||
RBAM_034610__    151 HSTPIRKAAELIGPQNVFSFGIRSGMKEEFEWAKENGMHISKFEVLEPLK    200

BSNT_05732___    201 EVLPKLAGRPVYVTIDIDVLDPAHAPGTGTVDAGGITSKELLASVHEIAR    250
                     :|||:|||||||||||||||||||||||||||||||||||||||:|||||
RBAM_034610__    201 KVLPQLAGRPVYVTIDIDVLDPAHAPGTGTVDAGGITSKELLASIHEIAR    250

BSNT_05732___    251 SEVNVKGADLVEVAPVYDHSEQTANTASKIIREMLLGFVK    290
                     |||||||||||||||||||||||||||||:||||||||||
RBAM_034610__    251 SEVNVKGADLVEVAPVYDHSEQTANTASKMIREMLLGFVK    290


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