Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05732 and RBAM_034610
See
Amino acid alignment /
Visit
BSNT_05732 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_05732___speB.1.9828.seq
# -bsequence dna-align/RBAM_034610___speB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05732___speB-RBAM_034610___speB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05732___speB-RBAM_034610___speB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05732___speB
# 2: RBAM_034610___speB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity: 733/873 (84.0%)
# Similarity: 733/873 (84.0%)
# Gaps: 0/873 ( 0.0%)
# Score: 3105.0
#
#
#=======================================
BSNT_05732___ 1 ATGAGATTTGATGAAGCTTATTCAGGAAAAGTATTTATCGCGAGCCGTCC 50
|||||.|||||||||||.|||||||||||||||||||||||.|||||.||
RBAM_034610__ 1 ATGAGGTTTGATGAAGCATATTCAGGAAAAGTATTTATCGCAAGCCGCCC 50
BSNT_05732___ 51 CGAGTGGGAAGAGGCGGACGCCATTCTTTACGGCATGCCGATGGACTGGA 100
|||.|||.||||||||||||||||.||||||||||||||||||||.||||
RBAM_034610__ 51 CGACTGGAAAGAGGCGGACGCCATCCTTTACGGCATGCCGATGGATTGGA 100
BSNT_05732___ 101 CAGTCAGCTATCGCCCGGGCTCACGCTTTGGTCCAAGCAGAATCCGTGAG 150
|.||||||||.||.|||||.||.||.||.||.||..|.||||||||.|||
RBAM_034610__ 101 CGGTCAGCTACCGTCCGGGTTCGCGTTTCGGCCCGGGGAGAATCCGCGAG 150
BSNT_05732___ 151 GTGTCAATCGGCCTTGAGGAATACAGCCCATATTTAGACCGCGATCTGGC 200
|||||.|||||.|||||.|||||||||||.|||.|.|||||.||..||||
RBAM_034610__ 151 GTGTCTATCGGTCTTGAAGAATACAGCCCGTATCTCGACCGTGACTTGGC 200
BSNT_05732___ 201 TGACTTGAACTTCTTTGACGCTGGCGACATTCCGCTGCCGTTCGGAAATC 250
|||.|||||.|||||||||||.||||||||||||||.||||||||.||||
RBAM_034610__ 201 TGATTTGAATTTCTTTGACGCCGGCGACATTCCGCTTCCGTTCGGCAATC 250
BSNT_05732___ 251 CGCAGCGAAGCCTGGATATGATTGAAGAGTACGTGGACAGCATTTTAGAA 300
||||..|||||||.||||||||||||||.|||||||||||||||||||||
RBAM_034610__ 251 CGCAAAGAAGCCTTGATATGATTGAAGAATACGTGGACAGCATTTTAGAA 300
BSNT_05732___ 301 AAAGGGAAGTTCCCAATGGGTATGGGGGGAGAGCACCTCGTGTCATGGCC 350
|||||.||||||||..|.||.|||||.||.||||||||.||.||||||||
RBAM_034610__ 301 AAAGGAAAGTTCCCGCTCGGCATGGGAGGGGAGCACCTTGTATCATGGCC 350
BSNT_05732___ 351 TGTCATTAAAGCGATGTACAAGAAATACCCAGACCTTGCGATTATCCATT 400
||||||.|||||.|||||.|||||.|..||.||||||||.||.||.||||
RBAM_034610__ 351 TGTCATAAAAGCCATGTATAAGAAGTTTCCGGACCTTGCCATCATTCATT 400
BSNT_05732___ 401 TTGACGCACATACAGATCTTCGAGTTGATTATGAGGGAGAACCGCTTTCT 450
|||||||.||.||.||.||.||....||||||||.||.|||||||||||.
RBAM_034610__ 401 TTGACGCGCACACCGACCTGCGCACGGATTATGAAGGCGAACCGCTTTCC 450
BSNT_05732___ 451 CACTCCACGCCGATCCGTAAGGCGGCAGAATTGATCGGACCGCACAATGT 500
|||||.||.||||||||.||.|||||.||..|.|||||.|||||.||.||
RBAM_034610__ 451 CACTCTACTCCGATCCGCAAAGCGGCCGAGCTCATCGGGCCGCAAAACGT 500
BSNT_05732___ 501 GTATTCATTCGGAATCCGTTCCGGCATGAAAGAAGAGTTTGAATGGGCGA 550
.|.|||||||||.|||||||||||.|||||.|||||.|||||||||||||
RBAM_034610__ 501 ATTTTCATTCGGCATCCGTTCCGGAATGAAGGAAGAATTTGAATGGGCGA 550
BSNT_05732___ 551 AGGAAAACGGCATGCACATCTCAAAATTTGAAGTGCTTGAACCGCTGAAA 600
|.|||||||||||||||||.||.||.||||||||||||||.|||||||||
RBAM_034610__ 551 AAGAAAACGGCATGCACATTTCTAAGTTTGAAGTGCTTGAGCCGCTGAAA 600
BSNT_05732___ 601 GAGGTGCTTCCGAAGCTGGCGGGCCGTCCGGTTTATGTCACAATTGACAT 650
.|.|||||.|||.||||.|||||.||.||.|||||||||||.||.||.||
RBAM_034610__ 601 AAAGTGCTGCCGCAGCTTGCGGGACGCCCTGTTTATGTCACCATCGATAT 650
BSNT_05732___ 651 TGACGTATTAGACCCTGCACACGCACCGGGTACAGGAACGGTTGACGCCG 700
.|||||..|.||.||.||.||.||.|||||.||.||.|||||||||||.|
RBAM_034610__ 651 CGACGTTCTTGATCCCGCTCATGCGCCGGGAACGGGCACGGTTGACGCAG 700
BSNT_05732___ 701 GCGGCATCACGTCTAAAGAACTGCTTGCATCGGTCCATGAAATTGCGCGT 750
|.||||||||||||||||||.||||.||.||..||||||||||.|||||.
RBAM_034610__ 701 GAGGCATCACGTCTAAAGAATTGCTCGCGTCCATCCATGAAATCGCGCGC 750
BSNT_05732___ 751 TCAGAGGTAAACGTAAAGGGCGCTGATTTAGTGGAAGTCGCGCCGGTATA 800
||.||.||.||||||||.||||||||..|.||.||||||||||||||.||
RBAM_034610__ 751 TCGGAAGTCAACGTAAAAGGCGCTGACCTCGTAGAAGTCGCGCCGGTCTA 800
BSNT_05732___ 801 CGACCACTCAGAGCAAACGGCAAACACAGCCAGCAAAATCATCCGTGAAA 850
.|||||||||||.|||||.||||||||.||.|||||.||.||.|||||||
RBAM_034610__ 801 TGACCACTCAGAACAAACCGCAAACACGGCAAGCAAGATGATTCGTGAAA 850
BSNT_05732___ 851 TGCTGCTTGGGTTTGTGAAATAA 873
|||||||||||||||||||||||
RBAM_034610__ 851 TGCTGCTTGGGTTTGTGAAATAA 873
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.