Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02044 and RBAM_034570

See DNA alignment / Visit BSNT_02044 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02044.1.9828.seq
#    -bsequence pep-align/RBAM_034570.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02044-RBAM_034570.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02044-RBAM_034570.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02044
# 2: RBAM_034570
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      33/64 (51.6%)
# Similarity:    48/64 (75.0%)
# Gaps:           3/64 ( 4.7%)
# Score: 194.0
# 
#
#=======================================

BSNT_02044         1 MKEYEFVRVELSTMRRRPKEDYQQIIHDYAKRGWRFVQIFAPSIDGYGAA     50
                     |.||:|::||::..:.:|||||::||..|:::||:.||||||.|.|||||
RBAM_034570        1 MYEYKFIKVEVNRWKGKPKEDYKEIIEKYSQQGWKLVQIFAPPISGYGAA     50

BSNT_02044        51 AYFEIIFERDAEKA     64
                     .||:||.|:..   
RBAM_034570       51 DYFDIILEKKV---     61


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