Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02044 and RBAM_034570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02044.1.9828.seq
# -bsequence dna-align/RBAM_034570.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02044-RBAM_034570.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02044-RBAM_034570.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02044
# 2: RBAM_034570
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 131/211 (62.1%)
# Similarity: 131/211 (62.1%)
# Gaps: 41/211 (19.4%)
# Score: 412.0
#
#
#=======================================
BSNT_02044 1 ATGAAAGAATATGAATTCGTAAGAGTTGAGCTGAGTA---CGATGAGAA- 46
|||.|.||||||.|.|||.|||.|||.|| |||| ||||| |||
RBAM_034570 1 ATGTACGAATATAAGTTCATAAAAGTAGA----AGTAAACCGATG-GAAA 45
BSNT_02044 47 -GAAGGCCTAAAGAAGACTACCAGCAAATCATCCATGATTATGCGAAAAG 95
|||.|||||||||||||||..|..||||.|| .||||||
RBAM_034570 46 GGAAAGCCTAAAGAAGACTATAAAGAAATTAT-----------TGAAAAG 84
BSNT_02044 96 -----------AGGCTGGAGATTCGTTCAGATTTTCGCTCCCAGTATAGA 134
|||.||||...|.|||||.||.||.|||||...|||...
RBAM_034570 85 TATTCTCAGCAAGGATGGAAGCTGGTTCAAATATTTGCTCCTCCTATTTC 134
BSNT_02044 135 TGGGTATGGGGCAGCTGCTTATTTTGAAATCATATTTGAAAGGGATGCGG 184
.||.|||||||||||.|.|||||||||.||.||..||||||
RBAM_034570 135 AGGTTATGGGGCAGCCGATTATTTTGATATTATTCTTGAAA--------- 175
BSNT_02044 185 AAAAAGCTTAG 195
||||||..||.
RBAM_034570 176 AAAAAGTATAA 186
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