Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05726 and RBAM_034520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_05726___ywhK.1.9828.seq
# -bsequence pep-align/RBAM_034520___ywhK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05726___ywhK-RBAM_034520___ywhK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05726___ywhK-RBAM_034520___ywhK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05726___ywhK
# 2: RBAM_034520___ywhK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 400/451 (88.7%)
# Similarity: 420/451 (93.1%)
# Gaps: 0/451 ( 0.0%)
# Score: 2072.0
#
#
#=======================================
BSNT_05726___ 1 MRKNKLSFKEKAGAEQEECLCFCEGEASREAMFQAPIELPEGFVVDPAEA 50
||.|||||||||||.|||||||||.|||||||||||||||||||||||||
RBAM_034520__ 1 MRNNKLSFKEKAGAAQEECLCFCEEEASREAMFQAPIELPEGFVVDPAEA 50
BSNT_05726___ 51 VANVTWNADSLSCVSDRCLIQTGPEPDEVGVQFAVRLQGTVTLLVSVSPV 100
||||||||||||||.:||.|:|||||||:|||||||||||||||||||||
RBAM_034520__ 51 VANVTWNADSLSCVIERCFIETGPEPDEIGVQFAVRLQGTVTLLVSVSPV 100
BSNT_05726___ 101 RNQYGQGDGAVSVIHNAEIDQVVYYSDEPDDCPDISDITIENLVVVPPFY 150
|||||||:|:||||.|||||||||||||||||||:||||||||:||||||
RBAM_034520__ 101 RNQYGQGNGSVSVIRNAEIDQVVYYSDEPDDCPDVSDITIENLIVVPPFY 150
BSNT_05726___ 151 GSPLSVTGTIVLVPEPEPVYAFTANPNDQSVSVIDTNTHTVVTTIALPYN 200
|||||||||||.|||||||||||||||||||||||||||||||||||||.
RBAM_034520__ 151 GSPLSVTGTIVFVPEPEPVYAFTANPNDQSVSVIDTNTHTVVTTIALPYR 200
BSNT_05726___ 201 PAGIEITPDKSAVFVLHPNNNVISVIDYDTLTVTATILLDQPPRLIRFIP 250
|.|||||||||||||||.|||||||||||||||||:|||||||..::.||
RBAM_034520__ 201 PTGIEITPDKSAVFVLHFNNNVISVIDYDTLTVTASILLDQPPGSVKCIP 250
BSNT_05726___ 251 NHEFAYVFTGTAIYVIGIDTLTVERSIPVEGFDIAIDPNGLFAYVLNFGL 300
|||||||...|||||||||||||:|||||||||.||||||||||||:|||
RBAM_034520__ 251 NHEFAYVLGDTAIYVIGIDTLTVDRSIPVEGFDFAIDPNGLFAYVLDFGL 300
BSNT_05726___ 301 VQKVDLSTGEVLGTIERELIVSSIETDSTERYAYVLEQEFLFNYLTVIDL 350
||||||.||||.||||||||||||||:..|||||||||||||||||||||
RBAM_034520__ 301 VQKVDLFTGEVTGTIERELIVSSIETNWPERYAYVLEQEFLFNYLTVIDL 350
BSNT_05726___ 351 NTFTIRDTQELEPDGLYVMFTSGSEVYLHDSFTGNLYSVSPNGAGVIGNL 400
|||||..||:|||||.|||||||||||||||||||||:|||||||||||:
RBAM_034520__ 351 NTFTISITQDLEPDGQYVMFTSGSEVYLHDSFTGNLYAVSPNGAGVIGNV 400
BSNT_05726___ 401 PQSATDYAFTPNGDFLYTTRFIEQSIIVYNTDDYSVETVISLGVSPGAIT 450
||||.|:||||||:|||...|:||:|.||||||||||||||||||||.|.
RBAM_034520__ 401 PQSARDFAFTPNGEFLYAAHFLEQNITVYNTDDYSVETVISLGVSPGDIV 450
BSNT_05726___ 451 I 451
|
RBAM_034520__ 451 I 451
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