Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05726 and RBAM_034520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_05726___ywhK.1.9828.seq
# -bsequence dna-align/RBAM_034520___ywhK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05726___ywhK-RBAM_034520___ywhK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05726___ywhK-RBAM_034520___ywhK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05726___ywhK
# 2: RBAM_034520___ywhK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity: 1219/1356 (89.9%)
# Similarity: 1219/1356 (89.9%)
# Gaps: 0/1356 ( 0.0%)
# Score: 5547.0
#
#
#=======================================
BSNT_05726___ 1 ATGAGAAAAAATAAGCTTTCCTTTAAAGAAAAAGCAGGAGCAGAACAAGA 50
||||||||.||.|||||||||||||||||||||||||||||.|.||||||
RBAM_034520__ 1 ATGAGAAATAACAAGCTTTCCTTTAAAGAAAAAGCAGGAGCCGCACAAGA 50
BSNT_05726___ 51 AGAGTGCTTATGTTTTTGTGAGGGAGAAGCAAGCCGAGAAGCCATGTTTC 100
|||.||.|||||||||||.||||.||||||||||||.|||||.|||||||
RBAM_034520__ 51 AGAATGTTTATGTTTTTGCGAGGAAGAAGCAAGCCGTGAAGCGATGTTTC 100
BSNT_05726___ 101 AAGCGCCGATTGAGTTACCTGAAGGATTTGTCGTTGATCCGGCTGAAGCT 150
|||||||||||||.||.|||||.||.||||||||||||||||||||||||
RBAM_034520__ 101 AAGCGCCGATTGAATTGCCTGAGGGGTTTGTCGTTGATCCGGCTGAAGCT 150
BSNT_05726___ 151 GTTGCAAACGTGACGTGGAATGCAGACAGCCTTTCTTGTGTCAGTGACCG 200
|||||||||||||||||||||||||||||||||||||||||||.|||.||
RBAM_034520__ 151 GTTGCAAACGTGACGTGGAATGCAGACAGCCTTTCTTGTGTCATTGAACG 200
BSNT_05726___ 201 TTGCTTAATTCAAACGGGGCCAGAGCCTGATGAGGTCGGTGTTCAATTTG 250
.||.||.|||.|.||||||||||||||||||||..|||||||||||||.|
RBAM_034520__ 201 CTGTTTCATTGAGACGGGGCCAGAGCCTGATGAAATCGGTGTTCAATTCG 250
BSNT_05726___ 251 CAGTGCGCCTGCAGGGAACCGTTACGCTACTCGTCAGTGTCTCACCTGTG 300
|||||||||||||||||||.||||||||.|||||||||||||||||.|||
RBAM_034520__ 251 CAGTGCGCCTGCAGGGAACTGTTACGCTTCTCGTCAGTGTCTCACCAGTG 300
BSNT_05726___ 301 CGAAATCAATATGGACAAGGGGACGGGGCTGTTTCCGTCATTCACAATGC 350
|||||||||||||||||||||.|||||.|||||||.|||||.|.||||||
RBAM_034520__ 301 CGAAATCAATATGGACAAGGGAACGGGTCTGTTTCTGTCATCCGCAATGC 350
BSNT_05726___ 351 AGAAATCGATCAAGTCGTCTATTATTCCGATGAACCGGATGATTGCCCGG 400
|||.||.||.|||||||||||||||||||||||.||.|||||||||||||
RBAM_034520__ 351 AGAGATTGACCAAGTCGTCTATTATTCCGATGAGCCTGATGATTGCCCGG 400
BSNT_05726___ 401 ATATCAGTGACATCACGATTGAGAACCTTGTTGTTGTTCCGCCGTTTTAC 450
||.||||||||||.|||||.|||||||||.||||.||||||||.||.||.
RBAM_034520__ 401 ATGTCAGTGACATTACGATCGAGAACCTTATTGTCGTTCCGCCATTCTAT 450
BSNT_05726___ 451 GGTAGTCCTTTATCGGTGACGGGGACGATTGTGCTTGTACCGGAGCCGGA 500
||.||||||||||||||||||||.|||||||||.||||.||.||||||||
RBAM_034520__ 451 GGCAGTCCTTTATCGGTGACGGGCACGATTGTGTTTGTTCCTGAGCCGGA 500
BSNT_05726___ 501 ACCCGTCTACGCGTTTACAGCGAATCCAAATGATCAATCAGTTTCTGTGA 550
||||||.||.||||||||||||||||||||||||||||||||||||||||
RBAM_034520__ 501 ACCCGTTTATGCGTTTACAGCGAATCCAAATGATCAATCAGTTTCTGTGA 550
BSNT_05726___ 551 TTGATACAAACACCCATACTGTTGTGACAACGATTGCTCTTCCGTACAAT 600
|||||||||||||.||||||||||||||||||||||||||.||||||...
RBAM_034520__ 551 TTGATACAAACACTCATACTGTTGTGACAACGATTGCTCTACCGTACCGG 600
BSNT_05726___ 601 CCGGCAGGTATTGAAATTACGCCAGATAAAAGCGCTGTGTTTGTCTTACA 650
|||.|||||||||||||.||.||.||||||||.|||||||||||.||.||
RBAM_034520__ 601 CCGACAGGTATTGAAATAACTCCGGATAAAAGTGCTGTGTTTGTTTTGCA 650
BSNT_05726___ 651 TCCCAACAATAATGTGATTTCTGTCATCGATTATGACACATTAACAGTGA 700
...||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_034520__ 651 CTTCAACAATAATGTGATTTCTGTCATCGATTATGACACTTTAACAGTGA 700
BSNT_05726___ 701 CAGCAACTATATTGCTGGATCAGCCGCCTCGATTGATTAGATTTATCCCT 750
|||||.|.|||.|||||||||||||||||.|||.|.|.|.||..|||||.
RBAM_034520__ 701 CAGCATCCATACTGCTGGATCAGCCGCCTGGATCGGTAAAATGCATCCCA 750
BSNT_05726___ 751 AATCATGAGTTTGCTTATGTTTTCACCGGTACTGCCATTTATGTGATTGG 800
|||||||||||||||||||||.||..||.||||||.||||||||||||||
RBAM_034520__ 751 AATCATGAGTTTGCTTATGTTCTCGGCGATACTGCGATTTATGTGATTGG 800
BSNT_05726___ 801 AATTGATACGTTGACTGTTGAGAGGTCTATTCCTGTAGAAGGTTTTGATA 850
||||||||||||.|||||.||.|||||.||||||||.|||||.||||||.
RBAM_034520__ 801 AATTGATACGTTAACTGTGGATAGGTCGATTCCTGTGGAAGGATTTGATT 850
BSNT_05726___ 851 TTGCAATTGACCCCAATGGGTTGTTCGCCTATGTTCTTAATTTTGGGTTA 900
||||||||||.|||||||||||.|||||||||||||||.|||||||.|||
RBAM_034520__ 851 TTGCAATTGATCCCAATGGGTTATTCGCCTATGTTCTTGATTTTGGTTTA 900
BSNT_05726___ 901 GTGCAAAAAGTGGACTTATCTACCGGTGAAGTCTTAGGAACGATTGAACG 950
|||||||||||||||.|||..||||||||||||..|||||||||||||||
RBAM_034520__ 901 GTGCAAAAAGTGGACCTATTCACCGGTGAAGTCACAGGAACGATTGAACG 950
BSNT_05726___ 951 AGAGCTTATCGTATCATCCATAGAAACAGATTCTACGGAGCGGTATGCGT 1000
||||||||||||||||||||||||||||.|||...|||||||||||||||
RBAM_034520__ 951 AGAGCTTATCGTATCATCCATAGAAACAAATTGGCCGGAGCGGTATGCGT 1000
BSNT_05726___ 1001 ATGTATTAGAACAAGAATTCTTATTCAATTATTTGACGGTTATTGATTTA 1050
||||.|||||||||||||||||||||||||||||||||||||||||.|||
RBAM_034520__ 1001 ATGTCTTAGAACAAGAATTCTTATTCAATTATTTGACGGTTATTGACTTA 1050
BSNT_05726___ 1051 AATACGTTTACGATCAGGGATACCCAAGAGCTGGAGCCTGACGGGCTATA 1100
|||||||||||||||||...|||||||||.|||||||||||.||.|.|||
RBAM_034520__ 1051 AATACGTTTACGATCAGCATTACCCAAGACCTGGAGCCTGATGGCCAATA 1100
BSNT_05726___ 1101 TGTAATGTTTACGAGTGGATCAGAGGTGTATTTACATGACAGCTTCACTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034520__ 1101 TGTAATGTTTACGAGTGGATCAGAGGTGTATTTACATGACAGCTTCACTG 1150
BSNT_05726___ 1151 GCAATTTATATTCTGTCAGTCCGAATGGAGCAGGTGTAATTGGAAATCTT 1200
|||||||||||.||||||||||||||||.|||||.||.||.||||||.||
RBAM_034520__ 1151 GCAATTTATATGCTGTCAGTCCGAATGGTGCAGGCGTTATAGGAAATGTT 1200
BSNT_05726___ 1201 CCGCAATCAGCAACAGACTATGCGTTTACCCCGAATGGCGATTTTCTGTA 1250
||||||||.||||.|||||.|||||||||.|||||||||||.||||||||
RBAM_034520__ 1201 CCGCAATCGGCAAGAGACTTTGCGTTTACTCCGAATGGCGAATTTCTGTA 1250
BSNT_05726___ 1251 TACAACTCGTTTTATAGAGCAGAGCATCATTGTTTACAACACAGATGATT 1300
|.|..|||.||||.|||||||||.|||||.||||||||||||.|||||||
RBAM_034520__ 1251 TGCTGCTCATTTTTTAGAGCAGAACATCACTGTTTACAACACGGATGATT 1300
BSNT_05726___ 1301 ATTCTGTGGAAACTGTGATATCTCTTGGGGTTTCACCGGGTGCCATTACG 1350
||||||||||||||||||||||||||||||||||||||||.|..|||..|
RBAM_034520__ 1301 ATTCTGTGGAAACTGTGATATCTCTTGGGGTTTCACCGGGAGATATTGTG 1350
BSNT_05726___ 1351 ATTTAA 1356
||||||
RBAM_034520__ 1351 ATTTAA 1356
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