Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05711 and RBAM_034490

See DNA alignment / Visit BSNT_05711 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_05711___ywiB.1.9828.seq
#    -bsequence pep-align/RBAM_034490___ywiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05711___ywiB
# 2: RBAM_034490___ywiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     133/142 (93.7%)
# Similarity:   137/142 (96.5%)
# Gaps:           0/142 ( 0.0%)
# Score: 687.0
# 
#
#=======================================

BSNT_05711___      1 MKQETPITLHVKSVIEDDGNQEVIEFRTTGFYYVKQNKVYLSYYEEHDLG     50
                     ||||||||||||||||||||.|||||||||||||||.|||||||||||||
RBAM_034490__      1 MKQETPITLHVKSVIEDDGNDEVIEFRTTGFYYVKQQKVYLSYYEEHDLG     50

BSNT_05711___     51 KVKTIVKVSEGEVLVMRSGAVKMNQRFVKGASTIAKYKMSFGELELKTST    100
                     ||||||||||||||:||||||||||||:.|||||||||||||||||:|||
RBAM_034490__     51 KVKTIVKVSEGEVLIMRSGAVKMNQRFITGASTIAKYKMSFGELELETST    100

BSNT_05711___    101 KSIQSDLDEEKGRISIAYDMHVGDEQEHLHNMTITYEGGTHA    142
                     |||||||.||||||||||||||||.|:|||||||||||||||
RBAM_034490__    101 KSIQSDLGEEKGRISIAYDMHVGDGQQHLHNMTITYEGGTHA    142


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