Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05711 and RBAM_034490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_05711___ywiB.1.9828.seq
# -bsequence dna-align/RBAM_034490___ywiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05711___ywiB
# 2: RBAM_034490___ywiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity: 408/429 (95.1%)
# Similarity: 408/429 (95.1%)
# Gaps: 0/429 ( 0.0%)
# Score: 1956.0
#
#
#=======================================
BSNT_05711___ 1 ATGAAGCAAGAGACACCGATAACACTCCATGTGAAGTCTGTGATCGAGGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034490__ 1 ATGAAGCAAGAGACACCGATAACACTCCATGTGAAGTCTGTGATCGAGGA 50
BSNT_05711___ 51 TGACGGAAACCAAGAAGTCATCGAATTCCGCACCACCGGATTTTACTATG 100
|||||||||..|.|||||||||||||||||.||.||||||||||||||||
RBAM_034490__ 51 TGACGGAAATGATGAAGTCATCGAATTCCGTACTACCGGATTTTACTATG 100
BSNT_05711___ 101 TAAAACAAAATAAAGTGTATCTATCTTATTATGAAGAACACGACTTAGGC 150
||||||||.|.|||||||||||||||||||||||||||||||||.|||||
RBAM_034490__ 101 TAAAACAACAAAAAGTGTATCTATCTTATTATGAAGAACACGACCTAGGC 150
BSNT_05711___ 151 AAAGTCAAAACGATTGTGAAAGTAAGCGAAGGCGAAGTCCTGGTCATGAG 200
|||||.||||||||||||||.||.||||||||||||||||||.|||||||
RBAM_034490__ 151 AAAGTAAAAACGATTGTGAAGGTGAGCGAAGGCGAAGTCCTGATCATGAG 200
BSNT_05711___ 201 GTCAGGCGCTGTCAAAATGAATCAGCGTTTCGTAAAGGGAGCTTCCACAA 250
||||||||||||.||||||||||||||||||.|||.||||||||||||||
RBAM_034490__ 201 GTCAGGCGCTGTTAAAATGAATCAGCGTTTCATAACGGGAGCTTCCACAA 250
BSNT_05711___ 251 TTGCTAAATATAAAATGTCATTTGGTGAGCTTGAGCTGAAAACAAGCACA 300
||||.|||||||||||||||||||||||||||||||||.|||||||||||
RBAM_034490__ 251 TTGCGAAATATAAAATGTCATTTGGTGAGCTTGAGCTGGAAACAAGCACA 300
BSNT_05711___ 301 AAATCGATTCAATCTGATCTCGATGAAGAAAAAGGCCGTATCAGCATCGC 350
||||||||||||||||||||||.|||||||||||||||.|||||||||||
RBAM_034490__ 301 AAATCGATTCAATCTGATCTCGGTGAAGAAAAAGGCCGAATCAGCATCGC 350
BSNT_05711___ 351 ATATGACATGCATGTCGGAGACGAGCAGGAGCATTTACATAATATGACGA 400
|||||||||||||||||||||||.||||.|||||||||||||||||||||
RBAM_034490__ 351 ATATGACATGCATGTCGGAGACGGGCAGCAGCATTTACATAATATGACGA 400
BSNT_05711___ 401 TCACGTATGAGGGAGGAACTCACGCATGA 429
|||||||||||||||||||||||||||||
RBAM_034490__ 401 TCACGTATGAGGGAGGAACTCACGCATGA 429
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