Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05711 and RBAM_034490

See Amino acid alignment / Visit BSNT_05711 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence dna-align/BSNT_05711___ywiB.1.9828.seq
#    -bsequence dna-align/RBAM_034490___ywiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05711___ywiB-RBAM_034490___ywiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05711___ywiB
# 2: RBAM_034490___ywiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity:     408/429 (95.1%)
# Similarity:   408/429 (95.1%)
# Gaps:           0/429 ( 0.0%)
# Score: 1956.0
# 
#
#=======================================

BSNT_05711___      1 ATGAAGCAAGAGACACCGATAACACTCCATGTGAAGTCTGTGATCGAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034490__      1 ATGAAGCAAGAGACACCGATAACACTCCATGTGAAGTCTGTGATCGAGGA     50

BSNT_05711___     51 TGACGGAAACCAAGAAGTCATCGAATTCCGCACCACCGGATTTTACTATG    100
                     |||||||||..|.|||||||||||||||||.||.||||||||||||||||
RBAM_034490__     51 TGACGGAAATGATGAAGTCATCGAATTCCGTACTACCGGATTTTACTATG    100

BSNT_05711___    101 TAAAACAAAATAAAGTGTATCTATCTTATTATGAAGAACACGACTTAGGC    150
                     ||||||||.|.|||||||||||||||||||||||||||||||||.|||||
RBAM_034490__    101 TAAAACAACAAAAAGTGTATCTATCTTATTATGAAGAACACGACCTAGGC    150

BSNT_05711___    151 AAAGTCAAAACGATTGTGAAAGTAAGCGAAGGCGAAGTCCTGGTCATGAG    200
                     |||||.||||||||||||||.||.||||||||||||||||||.|||||||
RBAM_034490__    151 AAAGTAAAAACGATTGTGAAGGTGAGCGAAGGCGAAGTCCTGATCATGAG    200

BSNT_05711___    201 GTCAGGCGCTGTCAAAATGAATCAGCGTTTCGTAAAGGGAGCTTCCACAA    250
                     ||||||||||||.||||||||||||||||||.|||.||||||||||||||
RBAM_034490__    201 GTCAGGCGCTGTTAAAATGAATCAGCGTTTCATAACGGGAGCTTCCACAA    250

BSNT_05711___    251 TTGCTAAATATAAAATGTCATTTGGTGAGCTTGAGCTGAAAACAAGCACA    300
                     ||||.|||||||||||||||||||||||||||||||||.|||||||||||
RBAM_034490__    251 TTGCGAAATATAAAATGTCATTTGGTGAGCTTGAGCTGGAAACAAGCACA    300

BSNT_05711___    301 AAATCGATTCAATCTGATCTCGATGAAGAAAAAGGCCGTATCAGCATCGC    350
                     ||||||||||||||||||||||.|||||||||||||||.|||||||||||
RBAM_034490__    301 AAATCGATTCAATCTGATCTCGGTGAAGAAAAAGGCCGAATCAGCATCGC    350

BSNT_05711___    351 ATATGACATGCATGTCGGAGACGAGCAGGAGCATTTACATAATATGACGA    400
                     |||||||||||||||||||||||.||||.|||||||||||||||||||||
RBAM_034490__    351 ATATGACATGCATGTCGGAGACGGGCAGCAGCATTTACATAATATGACGA    400

BSNT_05711___    401 TCACGTATGAGGGAGGAACTCACGCATGA    429
                     |||||||||||||||||||||||||||||
RBAM_034490__    401 TCACGTATGAGGGAGGAACTCACGCATGA    429


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