Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05706 and RBAM_034460

See DNA alignment / Visit BSNT_05706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_05706___fnr.1.9828.seq
#    -bsequence pep-align/RBAM_034460___fnr.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05706___fnr-RBAM_034460___fnr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05706___fnr-RBAM_034460___fnr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05706___fnr
# 2: RBAM_034460___fnr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     222/238 (93.3%)
# Similarity:   233/238 (97.9%)
# Gaps:           0/238 ( 0.0%)
# Score: 1141.0
# 
#
#=======================================

BSNT_05706___      1 MNFLSVRPSDSDLISSDLHELLESISTKRKMEKHTYLFREGMDAEELYLI     50
                     ||.||||.||.:|:|.:||||||||||||||:||||||:|||||:|||||
RBAM_034460__      1 MNILSVRKSDKELLSRELHELLESISTKRKMKKHTYLFQEGMDAKELYLI     50

BSNT_05706___     51 QSGLIEIGKLTSDGKDLTLRICQKHDIVGELTLFTEEPRYMLSAKVLEDG    100
                     ||||||||||||||||||||||||:||||||||||:||||||||||||||
RBAM_034460__     51 QSGLIEIGKLTSDGKDLTLRICQKNDIVGELTLFTDEPRYMLSAKVLEDG    100

BSNT_05706___    101 EVLVINKNKLEKELIQNGALTFEFMKWMSTHLRKIQSKIRDLLLHGKKGA    150
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_034460__    101 EVLVINKNKLEKELIQNGVLTFEFMKWMSTHLRKIQSKIRDLLLHGKKGA    150

BSNT_05706___    151 LYSTLIRLSNSYGVERSDGILINIVLTNQDLAKFCAAARESINRMLGDLR    200
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_034460__    151 LYSTLIRLSNSYGVERSDGILINIVLTNQDLAKFCAAARESVNRMLGDLR    200

BSNT_05706___    201 KKGVISIDESGKIILHKRDYLRCEIECENCPLEICNID    238
                     |:|||||||:||||||||||||||||||||||||||||
RBAM_034460__    201 KQGVISIDETGKIILHKRDYLRCEIECENCPLEICNID    238


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