Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05706 and RBAM_034460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_05706___fnr.1.9828.seq
# -bsequence dna-align/RBAM_034460___fnr.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05706___fnr-RBAM_034460___fnr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05706___fnr-RBAM_034460___fnr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05706___fnr
# 2: RBAM_034460___fnr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity: 647/717 (90.2%)
# Similarity: 647/717 (90.2%)
# Gaps: 0/717 ( 0.0%)
# Score: 2955.0
#
#
#=======================================
BSNT_05706___ 1 ATGAATTTTCTCTCTGTTCGACCATCTGATAGTGATCTTATTTCCAGCGA 50
||||||.||||||||||.|||..||||||||..||.|||.|||||.||||
RBAM_034460__ 1 ATGAATATTCTCTCTGTCCGAAAATCTGATAAAGAACTTCTTTCCCGCGA 50
BSNT_05706___ 51 TCTGCATGAATTGCTGGAATCGATCAGCACGAAAAGAAAAATGGAAAAAC 100
.||||||||||||||||||||||||||.||||||||.||||||.||||||
RBAM_034460__ 51 ACTGCATGAATTGCTGGAATCGATCAGTACGAAAAGGAAAATGAAAAAAC 100
BSNT_05706___ 101 ACACGTATTTGTTTCGGGAAGGAATGGATGCAGAAGAGCTTTATCTGATT 150
||||.||||||||||..|||||||||||||||.|||||||||||||||||
RBAM_034460__ 101 ACACTTATTTGTTTCAAGAAGGAATGGATGCAAAAGAGCTTTATCTGATT 150
BSNT_05706___ 151 CAATCAGGACTCATTGAAATCGGCAAGCTGACATCTGACGGAAAAGACCT 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_034460__ 151 CAATCAGGACTCATTGAAATCGGCAAGCTGACGTCTGACGGAAAAGACCT 200
BSNT_05706___ 201 GACGCTTAGAATCTGCCAAAAGCATGATATCGTCGGAGAATTAACACTTT 250
|||||||||||||||||||||..|.|||||.|||||.|||||.||.||.|
RBAM_034460__ 201 GACGCTTAGAATCTGCCAAAAAAACGATATTGTCGGGGAATTGACGCTAT 250
BSNT_05706___ 251 TCACTGAAGAACCAAGGTATATGCTCAGTGCAAAAGTGCTAGAGGATGGC 300
||||.||.||.||.||.||||||||||||||.||||||.|||||||||||
RBAM_034460__ 251 TCACAGATGAGCCGAGATATATGCTCAGTGCGAAAGTGTTAGAGGATGGC 300
BSNT_05706___ 301 GAGGTGCTCGTCATTAATAAAAATAAGCTGGAAAAAGAATTAATCCAAAA 350
|||||||||||||||||||||||.|||||||||||.|||||.||||||||
RBAM_034460__ 301 GAGGTGCTCGTCATTAATAAAAACAAGCTGGAAAAGGAATTGATCCAAAA 350
BSNT_05706___ 351 CGGCGCTTTGACATTTGAGTTCATGAAATGGATGAGCACGCACCTCCGGA 400
|||.|.||||||.|||||.||.|||||||||||||||||.||.||.||.|
RBAM_034460__ 351 CGGTGTTTTGACGTTTGAATTTATGAAATGGATGAGCACCCATCTTCGAA 400
BSNT_05706___ 401 AGATTCAGTCCAAAATCAGGGATCTGCTTCTTCATGGCAAAAAGGGGGCG 450
|.||.||||||||.||||||||.|||||||||||.|||||||||||||||
RBAM_034460__ 401 AAATCCAGTCCAAGATCAGGGACCTGCTTCTTCACGGCAAAAAGGGGGCG 450
BSNT_05706___ 451 CTCTATTCTACCCTTATCCGCTTATCAAACAGCTACGGAGTGGAGCGAAG 500
||||||||.|||||||||||||||||||||||||||||.|||||.|||||
RBAM_034460__ 451 CTCTATTCCACCCTTATCCGCTTATCAAACAGCTACGGGGTGGAACGAAG 500
BSNT_05706___ 501 CGACGGCATTCTGATTAACATTGTCCTGACAAATCAGGATTTGGCAAAGT 550
||||||.|||||||||||||||||.||||||||||||||||||||.||||
RBAM_034460__ 501 CGACGGGATTCTGATTAACATTGTGCTGACAAATCAGGATTTGGCCAAGT 550
BSNT_05706___ 551 TTTGTGCGGCTGCACGGGAAAGCATCAACCGTATGCTGGGAGATCTCCGC 600
||||.|||||.|||.||||.|||.|||||||.|||||||||||.||||||
RBAM_034460__ 551 TTTGCGCGGCGGCAAGGGAGAGCGTCAACCGCATGCTGGGAGACCTCCGC 600
BSNT_05706___ 601 AAAAAAGGGGTTATTTCGATAGACGAATCCGGAAAAATTATTTTGCACAA 650
|||.|||||||||||||||||||||||.||||||||||||||||||||||
RBAM_034460__ 601 AAACAAGGGGTTATTTCGATAGACGAAACCGGAAAAATTATTTTGCACAA 650
BSNT_05706___ 651 GCGGGACTATTTACGATGTGAGATTGAGTGTGAAAATTGCCCGCTGGAGA 700
||||||||||||||||||.|||||.||||||||||||||.|||||.||||
RBAM_034460__ 651 GCGGGACTATTTACGATGCGAGATCGAGTGTGAAAATTGTCCGCTTGAGA 700
BSNT_05706___ 701 TTTGCAATATTGACTGA 717
|.|||||||||||||||
RBAM_034460__ 701 TCTGCAATATTGACTGA 717
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