Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05703 and RBAM_034450

See DNA alignment / Visit BSNT_05703 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_05703___ywiC.1.9828.seq
#    -bsequence pep-align/RBAM_034450___ywiC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05703___ywiC-RBAM_034450___ywiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05703___ywiC-RBAM_034450___ywiC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05703___ywiC
# 2: RBAM_034450___ywiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     207/239 (86.6%)
# Similarity:   221/239 (92.5%)
# Gaps:           0/239 ( 0.0%)
# Score: 1168.0
# 
#
#=======================================

BSNT_05703___      1 MKALIPKQHGAWAMLLIPFLLGMVKGGPVIWHIPLFLGWLFLYLAVYPVT     50
                     |||:|||||||||||||||||||||||||.||||||||||||||.||||:
RBAM_034450__      1 MKAMIPKQHGAWAMLLIPFLLGMVKGGPVFWHIPLFLGWLFLYLTVYPVS     50

BSNT_05703___     51 LALKKKQSKPYQKWMCYYGFPACCFLMISVFHKPPLIWVGVSLLPLFLIH    100
                     |||||||.:|||||:.||||||||||:|||:|||.|:|:||.||||||||
RBAM_034450__     51 LALKKKQLQPYQKWIWYYGFPACCFLIISVYHKPQLVWIGVFLLPLFLIH    100

BSNT_05703___    101 MYFARRKNERALLNDVAGVLFFCSGGFASCWLGMGTLDGWAWFIFLQSAL    150
                     .::|||||||||.||:||||||||||.||||||.|.|||||||:||||||
RBAM_034450__    101 THYARRKNERALTNDIAGVLFFCSGGLASCWLGTGILDGWAWFLFLQSAL    150

BSNT_05703___    151 FFIGSSFYVKSVIRERKNRAFAYWSWGYHLLLPFLSALFGAGWAFLAFIP    200
                     ||:||||||||||||||||.||||||||||.|||||||.|||||||||||
RBAM_034450__    151 FFVGSSFYVKSVIRERKNRTFAYWSWGYHLFLPFLSALLGAGWAFLAFIP    200

BSNT_05703___    201 SSLRAWFFHGRDWPVKTIGILEIVNACFFLAVMCLFITR    239
                     ||||||||||||||||||||||||||.||.||||:.||.
RBAM_034450__    201 SSLRAWFFHGRDWPVKTIGILEIVNAGFFFAVMCICITS    239


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