Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05703 and RBAM_034450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_05703___ywiC.1.9828.seq
# -bsequence dna-align/RBAM_034450___ywiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05703___ywiC-RBAM_034450___ywiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05703___ywiC-RBAM_034450___ywiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05703___ywiC
# 2: RBAM_034450___ywiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity: 625/723 (86.4%)
# Similarity: 625/723 (86.4%)
# Gaps: 6/723 ( 0.8%)
# Score: 2716.0
#
#
#=======================================
BSNT_05703___ 1 ATGAAGGCGCTGATTCCGAAGCAGCACGGGGCGTGGGCGATGCTGCTGAT 50
|||||||||.|||||||||||||||||||.||.|||||||||||||||||
RBAM_034450__ 1 ATGAAGGCGATGATTCCGAAGCAGCACGGCGCATGGGCGATGCTGCTGAT 50
BSNT_05703___ 51 CCCATTTTTACTCGGCATGGTCAAGGGAGGCCCCGTTATTTGGCATATTC 100
.||||||||||||||||||||||||||||||||.|||.|.||||||||||
RBAM_034450__ 51 TCCATTTTTACTCGGCATGGTCAAGGGAGGCCCGGTTTTCTGGCATATTC 100
BSNT_05703___ 101 CGCTCTTCCTTGGTTGGCTTTTCCTATACTTAGCGGTTTATCCCGTTACG 150
|||||||.||.||.|||||.|||||.|||||..||||||||||||||.||
RBAM_034450__ 101 CGCTCTTTCTGGGCTGGCTGTTCCTTTACTTGACGGTTTATCCCGTTTCG 150
BSNT_05703___ 151 CTTGCCTTAAAAAAGAAACAAAGC--AAACCATATCAAAAGTGGATGTGT 198
||.||.||.|||||||||| ||| .|.||.||||||||||||||.||.
RBAM_034450__ 151 CTCGCTTTGAAAAAGAAAC--AGCTTCAGCCCTATCAAAAGTGGATATGG 198
BSNT_05703___ 199 TATTACGGTTTTCCCGCCTGCTGCTTTTTGATGATCTCGGTCTTTCATAA 248
||||||||||||||.|||||||||||||||||.||.||.||||.||||||
RBAM_034450__ 199 TATTACGGTTTTCCGGCCTGCTGCTTTTTGATCATTTCTGTCTATCATAA 248
BSNT_05703___ 249 GCCGCCTCTCATCTGGGTGGGCGTTTCTTTACTGCCGCTGTTTCTCATAC 298
|||||..|||.|||||.|.|||||||.||||.||||||||||||||||||
RBAM_034450__ 249 GCCGCAGCTCGTCTGGATCGGCGTTTTTTTATTGCCGCTGTTTCTCATAC 298
BSNT_05703___ 299 ATATGTATTTTGCCCGCAGAAAAAACGAACGAGC-CTTATTGAATGATGT 347
|||.|.|||.|||||||.|||||||||||||.|| ||.| .|||||||.|
RBAM_034450__ 299 ATACGCATTATGCCCGCCGAAAAAACGAACGGGCGCTCA-CGAATGATAT 347
BSNT_05703___ 348 TGCAGGTGTCTTGTTCTTTTGTTCGGGCGGGTTTGCGAGCTGCTGGCTGG 397
|||.|||||..|||||||||||||.||||||.||||||||||||||||||
RBAM_034450__ 348 TGCGGGTGTTCTGTTCTTTTGTTCAGGCGGGCTTGCGAGCTGCTGGCTGG 397
BSNT_05703___ 398 GGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCT 447
|.|.|||||.|||||||||||||||.||||||.|.||||||||.||.|||
RBAM_034450__ 398 GAACGGGAATCCTTGACGGCTGGGCCTGGTTTCTATTCTTGCAATCCGCT 447
BSNT_05703___ 448 TTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAG 497
|||||||||.||||||||||.|||||||||||||||||.||.||.|||||
RBAM_034450__ 448 TTATTTTTTGTCGGGAGTTCTTTTTATGTGAAATCGGTCATACGGGAGAG 497
BSNT_05703___ 498 AAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCC 547
|||||||||..|.||||||||||||||.||||||||||||||..|.||||
RBAM_034450__ 498 AAAAAACAGAACCTTTGCATACTGGTCGTGGGGATATCACCTCTTCCTCC 547
BSNT_05703___ 548 CCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATC 597
||||||||||.||||||.||||.|||||.|||||||||||||||||||||
RBAM_034450__ 548 CCTTTTTATCGGCTCTTCTCGGGGCAGGCTGGGCGTTTCTCGCTTTTATC 597
BSNT_05703___ 598 CCGAGCAGCTTGCGGGCATGGTTTTTTCATGGAAGGGATTGGCCCGTAAA 647
||.|||||..|||||||.|||||||||||.|||||.||.|||||.||.||
RBAM_034450__ 598 CCAAGCAGTCTGCGGGCCTGGTTTTTTCACGGAAGAGACTGGCCGGTGAA 647
BSNT_05703___ 648 AACGATTGGCATTCTGGAAATCGTGAATGCCTGCTTCTTTCTTGCCGTCA 697
||||||.|||||||||||||||||.||||||.||||||||.|.|||||||
RBAM_034450__ 648 AACGATCGGCATTCTGGAAATCGTAAATGCCGGCTTCTTTTTCGCCGTCA 697
BSNT_05703___ 698 TGTGCCTGTTTATCACAAGGTAA 720
||||..|.|.|||||||||.|.|
RBAM_034450__ 698 TGTGTATATGTATCACAAGCTGA 720
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