Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05701 and RBAM_034440

See DNA alignment / Visit BSNT_05701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_05701___arfM.1.9828.seq
#    -bsequence pep-align/RBAM_034440___arfM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05701___arfM-RBAM_034440___arfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05701___arfM-RBAM_034440___arfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05701___arfM
# 2: RBAM_034440___arfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     142/158 (89.9%)
# Similarity:   153/158 (96.8%)
# Gaps:           0/158 ( 0.0%)
# Score: 753.0
# 
#
#=======================================

BSNT_05701___      1 MNQCDYLLFLKQLPMFNEVPLSIVETLLKNGTFIRGSCDQSPSFLHSQSV     50
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_034440__      1 MNQCDYLLFLKQLPMFNEVPLSIVETLLKNGTFIRGSSDQSPSFLHSQSV     50

BSNT_05701___     51 YIVLKGSVRFMDTRLPEGSKTVALWEKGDVFPIDEKGGLYLSPFISVNAT    100
                     ||||||::||.|:||||||:|||||||||||||||||||.|||||||||:
RBAM_034440__     51 YIVLKGNIRFTDSRLPEGSQTVALWEKGDVFPIDEKGGLSLSPFISVNAS    100

BSNT_05701___    101 SDILILNIPYYIFKKMMSYHPQLQMNFLAMLQQNVFCSYQLFLRYLHTSQ    150
                     .|||:|:|||.:||:||||||:|||||||||||||||||||||||||||:
RBAM_034440__    101 PDILVLHIPYSVFKQMMSYHPRLQMNFLAMLQQNVFCSYQLFLRYLHTSR    150

BSNT_05701___    151 DENAEPGS    158
                     ||||||||
RBAM_034440__    151 DENAEPGS    158


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