Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05701 and RBAM_034440

See Amino acid alignment / Visit BSNT_05701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence dna-align/BSNT_05701___arfM.1.9828.seq
#    -bsequence dna-align/RBAM_034440___arfM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05701___arfM-RBAM_034440___arfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05701___arfM-RBAM_034440___arfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05701___arfM
# 2: RBAM_034440___arfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     436/477 (91.4%)
# Similarity:   436/477 (91.4%)
# Gaps:           0/477 ( 0.0%)
# Score: 2016.0
# 
#
#=======================================

BSNT_05701___      1 ATGAATCAGTGTGACTATTTATTATTTCTGAAACAACTTCCTATGTTTAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034440__      1 ATGAATCAGTGTGACTATTTATTATTTCTGAAACAACTTCCTATGTTTAA     50

BSNT_05701___     51 TGAAGTGCCTCTATCCATTGTCGAAACCTTGCTGAAAAACGGCACGTTTA    100
                     ||||||||||||.|||||||||||||||||||||||||||||.|||||||
RBAM_034440__     51 TGAAGTGCCTCTGTCCATTGTCGAAACCTTGCTGAAAAACGGGACGTTTA    100

BSNT_05701___    101 TCCGCGGTTCATGTGATCAGTCTCCATCTTTTCTTCATTCTCAATCTGTT    150
                     |||||||.||||.|||.||.||||||||.||||||||.||.|||||.|||
RBAM_034440__    101 TCCGCGGCTCATCTGACCAATCTCCATCCTTTCTTCACTCACAATCCGTT    150

BSNT_05701___    151 TATATTGTATTAAAAGGCAGTGTCCGTTTTATGGACACAAGGCTCCCTGA    200
                     |||||||||||||||||||.|.|||||||||.|||||..|||||||||||
RBAM_034440__    151 TATATTGTATTAAAAGGCAATATCCGTTTTACGGACAGCAGGCTCCCTGA    200

BSNT_05701___    201 AGGGTCGAAAACCGTTGCGCTGTGGGAAAAAGGCGATGTGTTTCCGATTG    250
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_034440__    201 AGGGTCGCAAACCGTTGCGCTGTGGGAAAAAGGCGATGTGTTTCCGATTG    250

BSNT_05701___    251 ATGAAAAAGGCGGGCTTTATTTATCGCCCTTTATCTCAGTCAATGCCACT    300
                     ||||||||||||||||.|.|||||||||.||||||||||||||||||.|.
RBAM_034440__    251 ATGAAAAAGGCGGGCTCTCTTTATCGCCTTTTATCTCAGTCAATGCCTCA    300

BSNT_05701___    301 TCAGACATTCTGATTCTCAACATCCCATATTACATATTTAAGAAAATGAT    350
                     .|.||.||||||.|.|||.|.||.|||||||.|.||||||||.|||||||
RBAM_034440__    301 CCGGATATTCTGGTACTCCATATTCCATATTCCGTATTTAAGCAAATGAT    350

BSNT_05701___    351 GTCTTATCATCCGCAGCTGCAAATGAACTTTTTGGCTATGCTTCAGCAAA    400
                     ||||||.|||||||.|||||||||||||||||||||.|||||||||||||
RBAM_034440__    351 GTCTTACCATCCGCGGCTGCAAATGAACTTTTTGGCGATGCTTCAGCAAA    400

BSNT_05701___    401 ATGTTTTTTGTTCCTATCAATTATTTTTGCGGTATCTGCATACATCACAG    450
                     ||||.||.|||||||||||.||.|||||||||||||||||||||||||.|
RBAM_034440__    401 ATGTCTTCTGTTCCTATCAGTTGTTTTTGCGGTATCTGCATACATCACGG    450

BSNT_05701___    451 GATGAAAACGCCGAGCCCGGTTCTTAA    477
                     ||||||||||||||.||||||||||||
RBAM_034440__    451 GATGAAAACGCCGAACCCGGTTCTTAA    477


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