Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05696 and RBAM_034420
See
DNA alignment /
Visit
BSNT_05696 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence pep-align/BSNT_05696___narH.1.9828.seq
# -bsequence pep-align/RBAM_034420___narH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05696___narH-RBAM_034420___narH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05696___narH-RBAM_034420___narH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05696___narH
# 2: RBAM_034420___narH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 487
# Identity: 472/487 (96.9%)
# Similarity: 476/487 (97.7%)
# Gaps: 8/487 ( 1.6%)
# Score: 2583.0
#
#
#=======================================
BSNT_05696___ 1 MKIKAQIGMVMNLDKCIGCHTCSVTCKNTWTNRSGAEYMYFNNVETKPGI 50
||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 1 --------MVMNLDKCIGCHTCSVTCKNTWTNRSGAEYMYFNNVETKPGI 42
BSNT_05696___ 51 GYPKQWEDQDKYKGGWTLKKGKLELKSGSKTNRLAGLFYNPNQPSIDDYY 100
||||||||||||||||||||||||||||.|||||||||||||||:|||||
RBAM_034420__ 43 GYPKQWEDQDKYKGGWTLKKGKLELKSGPKTNRLAGLFYNPNQPTIDDYY 92
BSNT_05696___ 101 EPWNYDYETLTNSPQKKHQPVARPKSSLTGDFMNIEWGPNWEDDLAGGHI 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 93 EPWNYDYETLTNSPQKKHQPVARPKSSLTGDFMNIEWGPNWEDDLAGGHI 142
BSNT_05696___ 151 TGLEDPNVQKMEESIKTEFDEVFMMYLPRICEHCINPACVSSCPSGAMYK 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 143 TGLEDPNVQKMEESIKTEFDEVFMMYLPRICEHCINPACVSSCPSGAMYK 192
BSNT_05696___ 201 REEDGIVLVDQNACRSWRYCVSSCPYKKVYFNWQTNKAEKCTLCFPRLEA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 193 REEDGIVLVDQNACRSWRYCVSSCPYKKVYFNWQTNKAEKCTLCFPRLEA 242
BSNT_05696___ 251 GLPTICSETCVGRIRYLGVMLYDADKVEEAASVENEKDLYHSQLDVFLDP 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 243 GLPTICSETCVGRIRYLGVMLYDADKVEEAASVENEKDLYHSQLDVFLDP 292
BSNT_05696___ 301 NDPEVAKLAKEQGIPAEWIEAAQQSPIYKMIIDWKIALPLHPEYRTLPMV 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 293 NDPEVAKLAKEQGIPAEWIEAAQQSPIYKMIIDWKIALPLHPEYRTLPMV 342
BSNT_05696___ 351 WYIPPLSPIMNLFEGKGSRQSAEDIFPAIDQMRIPIDYLAQLLTAGDTDH 400
||||||||||||||||||||:||.||||||||||||||||||||||||||
RBAM_034420__ 343 WYIPPLSPIMNLFEGKGSRQTAEAIFPAIDQMRIPIDYLAQLLTAGDTDH 392
BSNT_05696___ 401 IRSTLKKMSVMRQYMRAIQTNKSIDPELISSVGLTEQQIEDMYRLLAIAK 450
|||||||||||||||||:||||||||.|:|||||||||||||||||||||
RBAM_034420__ 393 IRSTLKKMSVMRQYMRAVQTNKSIDPALVSSVGLTEQQIEDMYRLLAIAK 442
BSNT_05696___ 451 YDDRFVIPSSHREEVSDLYAEQGSCGLSFSGGPGSCF 487
|||||||||||||||||||||||||||||||||||||
RBAM_034420__ 443 YDDRFVIPSSHREEVSDLYAEQGSCGLSFSGGPGSCF 479
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.