Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05696 and RBAM_034420

See Amino acid alignment / Visit BSNT_05696 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:12
# Commandline: needle
#    -asequence dna-align/BSNT_05696___narH.1.9828.seq
#    -bsequence dna-align/RBAM_034420___narH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05696___narH-RBAM_034420___narH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05696___narH-RBAM_034420___narH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05696___narH
# 2: RBAM_034420___narH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1464
# Identity:    1360/1464 (92.9%)
# Similarity:  1360/1464 (92.9%)
# Gaps:          24/1464 ( 1.6%)
# Score: 6480.0
# 
#
#=======================================

BSNT_05696___      1 TTGAAGATTAAAGCGCAAATCGGTATGGTCATGAACTTGGATAAATGCAT     50
                                             ||||||||||||||||||||||||||
RBAM_034420__      1 ------------------------ATGGTCATGAACTTGGATAAATGCAT     26

BSNT_05696___     51 CGGCTGCCACACGTGCAGCGTCACCTGCAAAAACACGTGGACAAACCGTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__     27 CGGCTGCCACACGTGCAGCGTCACCTGCAAAAACACGTGGACAAACCGTT     76

BSNT_05696___    101 CCGGTGCGGAATATATGTACTTCAATAATGTAGAAACAAAGCCGGGCATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__     77 CCGGTGCGGAATATATGTACTTCAATAATGTAGAAACAAAGCCGGGCATC    126

BSNT_05696___    151 GGCTACCCGAAGCAATGGGAGGACCAGGACAAATATAAAGGCGGCTGGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__    127 GGCTACCCGAAGCAATGGGAGGACCAGGACAAATATAAAGGCGGCTGGAC    176

BSNT_05696___    201 ATTGAAAAAAGGAAAGCTCGAGCTGAAATCGGGCTCGAAAACCAATCGGC    250
                     .|||||||||||||||||.||.||||||||.|||.|||||||.|||||||
RBAM_034420__    177 GTTGAAAAAAGGAAAGCTTGAACTGAAATCAGGCCCGAAAACGAATCGGC    226

BSNT_05696___    251 TTGCAGGCCTTTTCTATAATCCGAATCAGCCGTCGATTGATGATTACTAT    300
                     |.|||||||||||||||||.|||||.||||||.||||||||||.||||||
RBAM_034420__    227 TCGCAGGCCTTTTCTATAACCCGAACCAGCCGACGATTGATGACTACTAT    276

BSNT_05696___    301 GAACCCTGGAACTATGATTATGAAACATTAACGAACAGCCCGCAGAAAAA    350
                     |||||.||||||||||||||||||||||||||.|||||||||||||||||
RBAM_034420__    277 GAACCTTGGAACTATGATTATGAAACATTAACAAACAGCCCGCAGAAAAA    326

BSNT_05696___    351 ACACCAGCCGGTTGCACGCCCGAAATCGTCCTTGACGGGGGATTTCATGA    400
                     ||||||||||||.|||||.||||||||||||||||||||||||||.||||
RBAM_034420__    327 ACACCAGCCGGTGGCACGGCCGAAATCGTCCTTGACGGGGGATTTTATGA    376

BSNT_05696___    401 ATATCGAATGGGGACCGAACTGGGAGGATGATCTCGCGGGCGGCCACATA    450
                     |||||||||||||.||||||||||||||||||||||||||||||||.||.
RBAM_034420__    377 ATATCGAATGGGGTCCGAACTGGGAGGATGATCTCGCGGGCGGCCATATT    426

BSNT_05696___    451 ACGGGACTTGAAGATCCCAACGTACAAAAGATGGAGGAATCGATCAAAAC    500
                     ||.||.|||||||||||.|||||.|||||.||||||||||||||||||||
RBAM_034420__    427 ACAGGGCTTGAAGATCCAAACGTTCAAAAAATGGAGGAATCGATCAAAAC    476

BSNT_05696___    501 AGAATTCGATGAGGTTTTTATGATGTATTTGCCCCGTATTTGCGAGCACT    550
                     ||||||||||||.||.||||||||||||.||||.||||||||||||||||
RBAM_034420__    477 AGAATTCGATGAAGTCTTTATGATGTATCTGCCGCGTATTTGCGAGCACT    526

BSNT_05696___    551 GCATCAACCCGGCGTGCGTCTCATCCTGTCCATCCGGCGCCATGTACAAA    600
                     ||||.||.|||||||||||||||||||||||.||||||||||||||||||
RBAM_034420__    527 GCATTAATCCGGCGTGCGTCTCATCCTGTCCGTCCGGCGCCATGTACAAA    576

BSNT_05696___    601 CGCGAGGAGGACGGCATTGTGCTTGTGGATCAAAACGCATGCCGTTCATG    650
                     ||.||||||||||||||||||||||||||.|||||.||||||||||||||
RBAM_034420__    577 CGTGAGGAGGACGGCATTGTGCTTGTGGACCAAAATGCATGCCGTTCATG    626

BSNT_05696___    651 GAGATATTGCGTCTCATCCTGTCCTTATAAAAAAGTCTATTTTAACTGGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__    627 GAGATATTGCGTCTCATCCTGTCCTTATAAAAAAGTCTATTTTAACTGGC    676

BSNT_05696___    701 AAACGAACAAAGCGGAAAAATGCACACTCTGCTTTCCGCGTTTGGAGGCG    750
                     |.||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_034420__    677 AGACGAACAAAGCGGAAAAATGCACACTCTGCTTTCCGCGCTTGGAGGCG    726

BSNT_05696___    751 GGACTGCCAACCATCTGCTCTGAGACGTGTGTTGGCAGAATCCGCTACCT    800
                     ||.|||||.|||||||||||.||.||||||||.||||||||||||||.||
RBAM_034420__    727 GGGCTGCCGACCATCTGCTCCGAAACGTGTGTCGGCAGAATCCGCTATCT    776

BSNT_05696___    801 CGGCGTCATGCTGTATGACGCGGACAAAGTGGAGGAAGCGGCATCTGTTG    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_034420__    777 CGGCGTCATGCTGTATGACGCGGACAAAGTGGAGGAAGCGGCATCGGTTG    826

BSNT_05696___    851 AAAATGAAAAGGATCTCTACCATTCCCAATTGGACGTTTTTCTTGATCCG    900
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
RBAM_034420__    827 AAAATGAAAAGGATCTCTACCATTCCCAACTGGACGTTTTTCTTGATCCG    876

BSNT_05696___    901 AATGATCCTGAGGTTGCCAAGCTGGCAAAAGAACAAGGCATTCCGGCTGA    950
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_034420__    877 AATGATCCTGAGGTTGCCAAACTGGCAAAAGAACAAGGCATTCCGGCTGA    926

BSNT_05696___    951 ATGGATAGAGGCTGCGCAGCAATCGCCGATTTATAAAATGATCATTGACT   1000
                     ||||||||||||||||||||||||.|||||.|||||||||||||||||||
RBAM_034420__    927 ATGGATAGAGGCTGCGCAGCAATCACCGATCTATAAAATGATCATTGACT    976

BSNT_05696___   1001 GGAAGATTGCGCTGCCGCTTCATCCAGAGTACCGCACCCTGCCAATGGTG   1050
                     ||||||||||||||||||||||||||||||||||.||.|||||.||||||
RBAM_034420__    977 GGAAGATTGCGCTGCCGCTTCATCCAGAGTACCGTACGCTGCCGATGGTG   1026

BSNT_05696___   1051 TGGTACATTCCGCCGCTCAGCCCGATTATGAATCTCTTTGAAGGAAAAGG   1100
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_034420__   1027 TGGTACATTCCGCCGCTCAGTCCGATTATGAATCTCTTTGAAGGAAAAGG   1076

BSNT_05696___   1101 CAGCCGGCAATCCGCGGAAGATATTTTTCCGGCTATCGACCAAATGAGAA   1150
                     ||||||||||.|.|||||||..||||||||||||||||||||||||||||
RBAM_034420__   1077 CAGCCGGCAAACGGCGGAAGCGATTTTTCCGGCTATCGACCAAATGAGAA   1126

BSNT_05696___   1151 TCCCGATAGATTATTTGGCGCAGCTGTTAACAGCCGGTGATACGGATCAT   1200
                     |.|||||.||.||||||||||||.|.|||||.||||||||||||||||||
RBAM_034420__   1127 TTCCGATTGACTATTTGGCGCAGTTATTAACGGCCGGTGATACGGATCAT   1176

BSNT_05696___   1201 ATTCGGTCAACGTTGAAGAAAATGTCTGTCATGCGCCAGTATATGAGAGC   1250
                     |||||.||.|||||.|||||||||||||||||||||||||||||||||||
RBAM_034420__   1177 ATTCGATCCACGTTAAAGAAAATGTCTGTCATGCGCCAGTATATGAGAGC   1226

BSNT_05696___   1251 GATCCAGACGAATAAATCAATCGACCCGGAACTGATCTCCAGTGTCGGCT   1300
                     |.|.||||||||||||||.||||||||||.|.||.|||||||||||||||
RBAM_034420__   1227 GGTGCAGACGAATAAATCCATCGACCCGGCATTGGTCTCCAGTGTCGGCT   1276

BSNT_05696___   1301 TAACAGAACAGCAAATTGAAGATATGTATCGGCTGCTTGCGATTGCCAAA   1350
                     ||||||||||||||||||||||.||||||||||||||.||.||.||||||
RBAM_034420__   1277 TAACAGAACAGCAAATTGAAGACATGTATCGGCTGCTGGCAATCGCCAAA   1326

BSNT_05696___   1351 TATGATGACCGCTTTGTGATACCGAGCAGTCATCGAGAAGAAGTTTCAGA   1400
                     |||||||||||.||||||||.||||||||.||||||||||||||.|||||
RBAM_034420__   1327 TATGATGACCGTTTTGTGATCCCGAGCAGCCATCGAGAAGAAGTGTCAGA   1376

BSNT_05696___   1401 TTTATATGCTGAACAAGGGAGCTGCGGCTTATCATTTTCAGGCGGCCCCG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_034420__   1377 TTTATATGCTGAACAAGGGAGCTGCGGCTTATCATTTTCAGGCGGCCCGG   1426

BSNT_05696___   1451 GCTCCTGTTTCTAA   1464
                     ||||.|||||||||
RBAM_034420__   1427 GCTCTTGTTTCTAA   1440


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