Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05696 and RBAM_034420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_05696___narH.1.9828.seq
# -bsequence dna-align/RBAM_034420___narH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05696___narH-RBAM_034420___narH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05696___narH-RBAM_034420___narH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05696___narH
# 2: RBAM_034420___narH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1464
# Identity: 1360/1464 (92.9%)
# Similarity: 1360/1464 (92.9%)
# Gaps: 24/1464 ( 1.6%)
# Score: 6480.0
#
#
#=======================================
BSNT_05696___ 1 TTGAAGATTAAAGCGCAAATCGGTATGGTCATGAACTTGGATAAATGCAT 50
||||||||||||||||||||||||||
RBAM_034420__ 1 ------------------------ATGGTCATGAACTTGGATAAATGCAT 26
BSNT_05696___ 51 CGGCTGCCACACGTGCAGCGTCACCTGCAAAAACACGTGGACAAACCGTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 27 CGGCTGCCACACGTGCAGCGTCACCTGCAAAAACACGTGGACAAACCGTT 76
BSNT_05696___ 101 CCGGTGCGGAATATATGTACTTCAATAATGTAGAAACAAAGCCGGGCATC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 77 CCGGTGCGGAATATATGTACTTCAATAATGTAGAAACAAAGCCGGGCATC 126
BSNT_05696___ 151 GGCTACCCGAAGCAATGGGAGGACCAGGACAAATATAAAGGCGGCTGGAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 127 GGCTACCCGAAGCAATGGGAGGACCAGGACAAATATAAAGGCGGCTGGAC 176
BSNT_05696___ 201 ATTGAAAAAAGGAAAGCTCGAGCTGAAATCGGGCTCGAAAACCAATCGGC 250
.|||||||||||||||||.||.||||||||.|||.|||||||.|||||||
RBAM_034420__ 177 GTTGAAAAAAGGAAAGCTTGAACTGAAATCAGGCCCGAAAACGAATCGGC 226
BSNT_05696___ 251 TTGCAGGCCTTTTCTATAATCCGAATCAGCCGTCGATTGATGATTACTAT 300
|.|||||||||||||||||.|||||.||||||.||||||||||.||||||
RBAM_034420__ 227 TCGCAGGCCTTTTCTATAACCCGAACCAGCCGACGATTGATGACTACTAT 276
BSNT_05696___ 301 GAACCCTGGAACTATGATTATGAAACATTAACGAACAGCCCGCAGAAAAA 350
|||||.||||||||||||||||||||||||||.|||||||||||||||||
RBAM_034420__ 277 GAACCTTGGAACTATGATTATGAAACATTAACAAACAGCCCGCAGAAAAA 326
BSNT_05696___ 351 ACACCAGCCGGTTGCACGCCCGAAATCGTCCTTGACGGGGGATTTCATGA 400
||||||||||||.|||||.||||||||||||||||||||||||||.||||
RBAM_034420__ 327 ACACCAGCCGGTGGCACGGCCGAAATCGTCCTTGACGGGGGATTTTATGA 376
BSNT_05696___ 401 ATATCGAATGGGGACCGAACTGGGAGGATGATCTCGCGGGCGGCCACATA 450
|||||||||||||.||||||||||||||||||||||||||||||||.||.
RBAM_034420__ 377 ATATCGAATGGGGTCCGAACTGGGAGGATGATCTCGCGGGCGGCCATATT 426
BSNT_05696___ 451 ACGGGACTTGAAGATCCCAACGTACAAAAGATGGAGGAATCGATCAAAAC 500
||.||.|||||||||||.|||||.|||||.||||||||||||||||||||
RBAM_034420__ 427 ACAGGGCTTGAAGATCCAAACGTTCAAAAAATGGAGGAATCGATCAAAAC 476
BSNT_05696___ 501 AGAATTCGATGAGGTTTTTATGATGTATTTGCCCCGTATTTGCGAGCACT 550
||||||||||||.||.||||||||||||.||||.||||||||||||||||
RBAM_034420__ 477 AGAATTCGATGAAGTCTTTATGATGTATCTGCCGCGTATTTGCGAGCACT 526
BSNT_05696___ 551 GCATCAACCCGGCGTGCGTCTCATCCTGTCCATCCGGCGCCATGTACAAA 600
||||.||.|||||||||||||||||||||||.||||||||||||||||||
RBAM_034420__ 527 GCATTAATCCGGCGTGCGTCTCATCCTGTCCGTCCGGCGCCATGTACAAA 576
BSNT_05696___ 601 CGCGAGGAGGACGGCATTGTGCTTGTGGATCAAAACGCATGCCGTTCATG 650
||.||||||||||||||||||||||||||.|||||.||||||||||||||
RBAM_034420__ 577 CGTGAGGAGGACGGCATTGTGCTTGTGGACCAAAATGCATGCCGTTCATG 626
BSNT_05696___ 651 GAGATATTGCGTCTCATCCTGTCCTTATAAAAAAGTCTATTTTAACTGGC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034420__ 627 GAGATATTGCGTCTCATCCTGTCCTTATAAAAAAGTCTATTTTAACTGGC 676
BSNT_05696___ 701 AAACGAACAAAGCGGAAAAATGCACACTCTGCTTTCCGCGTTTGGAGGCG 750
|.||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_034420__ 677 AGACGAACAAAGCGGAAAAATGCACACTCTGCTTTCCGCGCTTGGAGGCG 726
BSNT_05696___ 751 GGACTGCCAACCATCTGCTCTGAGACGTGTGTTGGCAGAATCCGCTACCT 800
||.|||||.|||||||||||.||.||||||||.||||||||||||||.||
RBAM_034420__ 727 GGGCTGCCGACCATCTGCTCCGAAACGTGTGTCGGCAGAATCCGCTATCT 776
BSNT_05696___ 801 CGGCGTCATGCTGTATGACGCGGACAAAGTGGAGGAAGCGGCATCTGTTG 850
|||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_034420__ 777 CGGCGTCATGCTGTATGACGCGGACAAAGTGGAGGAAGCGGCATCGGTTG 826
BSNT_05696___ 851 AAAATGAAAAGGATCTCTACCATTCCCAATTGGACGTTTTTCTTGATCCG 900
|||||||||||||||||||||||||||||.||||||||||||||||||||
RBAM_034420__ 827 AAAATGAAAAGGATCTCTACCATTCCCAACTGGACGTTTTTCTTGATCCG 876
BSNT_05696___ 901 AATGATCCTGAGGTTGCCAAGCTGGCAAAAGAACAAGGCATTCCGGCTGA 950
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_034420__ 877 AATGATCCTGAGGTTGCCAAACTGGCAAAAGAACAAGGCATTCCGGCTGA 926
BSNT_05696___ 951 ATGGATAGAGGCTGCGCAGCAATCGCCGATTTATAAAATGATCATTGACT 1000
||||||||||||||||||||||||.|||||.|||||||||||||||||||
RBAM_034420__ 927 ATGGATAGAGGCTGCGCAGCAATCACCGATCTATAAAATGATCATTGACT 976
BSNT_05696___ 1001 GGAAGATTGCGCTGCCGCTTCATCCAGAGTACCGCACCCTGCCAATGGTG 1050
||||||||||||||||||||||||||||||||||.||.|||||.||||||
RBAM_034420__ 977 GGAAGATTGCGCTGCCGCTTCATCCAGAGTACCGTACGCTGCCGATGGTG 1026
BSNT_05696___ 1051 TGGTACATTCCGCCGCTCAGCCCGATTATGAATCTCTTTGAAGGAAAAGG 1100
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_034420__ 1027 TGGTACATTCCGCCGCTCAGTCCGATTATGAATCTCTTTGAAGGAAAAGG 1076
BSNT_05696___ 1101 CAGCCGGCAATCCGCGGAAGATATTTTTCCGGCTATCGACCAAATGAGAA 1150
||||||||||.|.|||||||..||||||||||||||||||||||||||||
RBAM_034420__ 1077 CAGCCGGCAAACGGCGGAAGCGATTTTTCCGGCTATCGACCAAATGAGAA 1126
BSNT_05696___ 1151 TCCCGATAGATTATTTGGCGCAGCTGTTAACAGCCGGTGATACGGATCAT 1200
|.|||||.||.||||||||||||.|.|||||.||||||||||||||||||
RBAM_034420__ 1127 TTCCGATTGACTATTTGGCGCAGTTATTAACGGCCGGTGATACGGATCAT 1176
BSNT_05696___ 1201 ATTCGGTCAACGTTGAAGAAAATGTCTGTCATGCGCCAGTATATGAGAGC 1250
|||||.||.|||||.|||||||||||||||||||||||||||||||||||
RBAM_034420__ 1177 ATTCGATCCACGTTAAAGAAAATGTCTGTCATGCGCCAGTATATGAGAGC 1226
BSNT_05696___ 1251 GATCCAGACGAATAAATCAATCGACCCGGAACTGATCTCCAGTGTCGGCT 1300
|.|.||||||||||||||.||||||||||.|.||.|||||||||||||||
RBAM_034420__ 1227 GGTGCAGACGAATAAATCCATCGACCCGGCATTGGTCTCCAGTGTCGGCT 1276
BSNT_05696___ 1301 TAACAGAACAGCAAATTGAAGATATGTATCGGCTGCTTGCGATTGCCAAA 1350
||||||||||||||||||||||.||||||||||||||.||.||.||||||
RBAM_034420__ 1277 TAACAGAACAGCAAATTGAAGACATGTATCGGCTGCTGGCAATCGCCAAA 1326
BSNT_05696___ 1351 TATGATGACCGCTTTGTGATACCGAGCAGTCATCGAGAAGAAGTTTCAGA 1400
|||||||||||.||||||||.||||||||.||||||||||||||.|||||
RBAM_034420__ 1327 TATGATGACCGTTTTGTGATCCCGAGCAGCCATCGAGAAGAAGTGTCAGA 1376
BSNT_05696___ 1401 TTTATATGCTGAACAAGGGAGCTGCGGCTTATCATTTTCAGGCGGCCCCG 1450
||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_034420__ 1377 TTTATATGCTGAACAAGGGAGCTGCGGCTTATCATTTTCAGGCGGCCCGG 1426
BSNT_05696___ 1451 GCTCCTGTTTCTAA 1464
||||.|||||||||
RBAM_034420__ 1427 GCTCTTGTTTCTAA 1440
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